Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.2e-171 605.5 309 100.0
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.4e-168 596.3 316 97.2
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.2e-161 573.2 307 95.1
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.3e-147 525.8 307 87.0
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 8.3e-142 507.3 307 82.4
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.9e-141 506.1 300 84.3
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 7.1e-133 477.6 269 88.8
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 1.4e-125 453.4 307 73.6
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.4e-120 436.8 307 71.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.4e-120 436.8 306 70.9
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.3e-118 430.3 310 69.4
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.1e-117 427.2 307 68.7
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.4e-117 426.0 307 68.7
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 9.3e-117 424.1 307 68.4
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 6.0e-116 421.4 303 68.6
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 8.7e-115 417.5 307 67.1
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 8.7e-115 417.5 307 67.8
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.9e-114 416.4 306 67.6
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.1e-113 412.9 307 67.4
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.8e-113 412.5 307 67.1
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 3.4e-111 405.6 307 65.8
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 3.4e-111 405.6 304 66.4
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 4.5e-111 405.2 307 65.1
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 5.8e-111 404.8 307 65.8
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 7.6e-111 404.4 285 69.1
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 9.9e-111 404.1 307 65.5
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 9.9e-111 404.1 307 66.1
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 3.8e-110 402.1 307 65.5
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 3.8e-110 402.1 306 67.0
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 8.4e-110 401.0 307 64.2
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 8.4e-110 401.0 306 65.4
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 1.4e-109 400.2 306 66.0
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.9e-109 399.8 305 65.6
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.4e-109 399.4 307 66.4
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 7.1e-109 397.9 303 64.4
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 1.2e-108 397.1 308 64.0
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.6e-108 396.7 302 66.2
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 7.9e-108 394.4 304 64.1
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.0e-107 394.0 306 65.0
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.0e-107 392.5 307 64.5
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 3.0e-107 392.5 309 63.4
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 8.7e-107 391.0 307 63.2
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 2.1e-105 386.3 304 63.2
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.4e-104 383.6 324 60.2
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 1.8e-104 383.3 305 63.0
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 2.4e-104 382.9 302 63.6
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.5e-103 380.2 304 62.8
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.5e-103 380.2 304 61.5
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 4.5e-103 378.6 304 62.5
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 7.6e-103 377.9 306 62.4
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.0e-102 377.5 307 61.2
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.0e-102 377.5 309 61.5
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.3e-102 377.1 306 61.4
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 2.9e-102 375.9 304 61.2
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.8e-102 375.6 310 61.0
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 4.9e-102 375.2 308 61.4
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 6.5e-102 374.8 307 59.9
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.5e-101 372.9 307 62.5
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 2.5e-101 372.9 305 62.3
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 7.1e-101 371.3 312 62.2
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 7.1e-101 371.3 300 61.0
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.6e-100 370.2 309 60.8
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.6e-100 370.2 294 64.3
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 3.5e-100 369.0 304 60.9
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 4.6e-100 368.6 305 61.3
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-99 367.5 306 60.5
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 1.0e-99 367.5 307 60.3
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 2.3e-99 366.3 308 61.0
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 3.0e-99 365.9 302 61.3
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 3.9e-99 365.5 306 60.5
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 3.9e-99 365.5 308 60.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 6.7e-99 364.8 306 60.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 6.7e-99 364.8 306 60.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 6.7e-99 364.8 306 60.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 6.7e-99 364.8 306 60.1
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 8.7e-99 364.4 300 61.0
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.1e-98 364.0 312 60.3
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 5.7e-98 361.7 304 61.5
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 9.6e-98 360.9 303 58.1
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 2.1e-97 359.8 303 61.7
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.8e-97 358.6 304 60.5
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 9.0e-96 354.4 304 59.5
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.4e-95 352.4 304 59.2
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 5.8e-95 351.7 304 59.2
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.3e-94 350.5 301 58.1
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 9.3e-93 344.4 337 54.6
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.6e-92 343.6 360 52.8
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 5.7e-90 335.1 267 62.5
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.4e-88 330.5 265 62.6
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.4e-88 329.7 303 54.8
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.1e-80 304.3 295 54.9
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 9.1e-80 301.2 278 55.0
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.4e-77 293.9 271 55.7
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 3.2e-77 292.7 299 53.5
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.6e-74 283.1 300 51.0
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 3.3e-74 282.7 303 51.2
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.8e-72 276.9 364 44.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 4.2e-61 239.2 266 49.2
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.1e-56 224.6 365 37.8
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 6.1e-52 208.8 263 45.2
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.0e-50 203.8 175 56.6
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 4.7e-44 182.6 167 56.9
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.0e-43 179.9 133 65.4
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.0e-38 164.9 131 59.5
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.0e-38 164.9 186 51.1
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-38 164.5 189 49.2
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 3.0e-38 163.3 131 59.5
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 3.0e-38 163.3 131 58.8
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 5.2e-35 152.5 121 65.3
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 6.4e-33 145.6 121 58.7
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 2.4e-24 117.1 89 64.0
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 4.1e-24 116.3 203 37.4
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.2e-24 115.2 89 64.0
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 4.0e-19 99.8 204 30.4
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.2e-12 78.2 119 37.0
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 2.6e-10 70.5 64 53.1
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.4e-08 63.9 56 55.4


User provided reference genes

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