Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 7.7e-73 276.9 130 100.0
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.2e-65 253.1 123 98.4
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 8.3e-51 203.8 122 79.5
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.4e-50 203.0 122 77.0
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 8.0e-46 187.2 108 79.6
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.1e-37 158.7 124 64.5
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.9e-34 149.4 110 66.4
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.2e-34 148.7 126 57.9
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.6e-33 144.8 117 63.2
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 1.0e-32 143.7 125 57.6
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.6e-32 141.0 125 56.8
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-31 139.4 125 56.8
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.6e-31 137.9 116 61.2
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 3.6e-30 135.2 125 55.2
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 3.1e-29 132.1 107 58.9
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.2e-29 131.3 124 55.6
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-28 129.8 129 56.6
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 4.1e-26 121.7 128 51.6
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 6.6e-24 114.4 103 60.2
Nitab4.5_0000397g0180 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-23 113.6 92 63.0
CAN.G257.108 Capsicum annuum HOM05D006536 ORTHO05D005877 6.2e-22 107.8 91 56.0
Nitab4.5_0006918g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-20 103.2 87 60.9
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.4e-18 95.9 132 40.9
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 8.7e-16 87.4 78 53.8
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 5.3e-13 78.2 135 34.8
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.5e-12 76.6 109 35.8
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 2.0e-12 76.3 122 36.1
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.4e-12 75.1 109 35.8
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.4e-12 75.1 109 34.9
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 5.8e-12 74.7 118 35.6
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 5.8e-12 74.7 122 36.1
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 7.6e-12 74.3 113 33.6
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 9.9e-12 73.9 104 35.6
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 9.9e-12 73.9 135 33.3
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.7e-11 73.2 129 36.4
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 1.7e-11 73.2 122 35.2
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.7e-11 73.2 114 35.1
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 4.9e-11 71.6 126 35.7
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 6.4e-11 71.2 122 36.1
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 3.2e-10 68.9 109 32.1
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 4.2e-10 68.6 130 34.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 4.2e-10 68.6 123 30.9
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 5.4e-10 68.2 133 30.8
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 5.4e-10 68.2 142 31.7
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 2.1e-09 66.2 132 31.8
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 4.6e-09 65.1 133 33.8
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 4.6e-09 65.1 133 31.6
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 4.6e-09 65.1 124 35.5
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 6.0e-09 64.7 95 33.7
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.8e-09 64.3 134 29.1
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.0e-08 63.9 130 31.5
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.3e-08 63.5 119 25.2
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 1.3e-08 63.5 132 31.1
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 1.7e-08 63.2 116 32.8
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 1.7e-08 63.2 131 29.0
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.7e-08 63.2 131 32.8
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 2.3e-08 62.8 120 35.0
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 3.0e-08 62.4 121 26.4
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.0e-08 62.4 124 26.6
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 3.0e-08 62.4 96 36.5
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 3.0e-08 62.4 94 35.1
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 6.6e-08 61.2 129 34.9
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.6e-08 61.2 120 34.2
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 6.6e-08 61.2 111 33.3
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 6.6e-08 61.2 113 31.0
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 6.6e-08 61.2 99 34.3
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 8.7e-08 60.8 131 34.4
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 8.7e-08 60.8 128 30.5
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 8.7e-08 60.8 134 32.1
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.7e-08 60.8 133 29.3
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.7e-08 60.8 130 30.8
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-07 60.5 112 29.5
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.5e-07 60.1 105 32.4
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.5e-07 60.1 107 32.7
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.5e-07 60.1 125 27.2
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 1.9e-07 59.7 108 29.6
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.9e-07 59.7 124 28.2
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-07 59.7 130 30.0
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 2.5e-07 59.3 131 29.8
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 2.5e-07 59.3 105 31.4
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 2.5e-07 59.3 127 32.3
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 4.3e-07 58.5 124 28.2
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 4.3e-07 58.5 124 28.2
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 5.6e-07 58.2 90 33.3
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 5.6e-07 58.2 121 33.1
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 7.3e-07 57.8 119 32.8
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 7.3e-07 57.8 132 31.1
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 7.3e-07 57.8 135 30.4
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 7.3e-07 57.8 119 25.2
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.3e-06 57.0 100 33.0
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.3e-06 57.0 122 26.2
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 1.3e-06 57.0 121 27.3
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 1.3e-06 57.0 108 30.6
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 1.6e-06 56.6 114 29.8
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-06 56.6 130 30.0
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-06 56.6 130 30.0
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-06 56.6 130 30.0
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 3.6e-06 55.5 129 30.2
Oeu007646.1 Olea europaea HOM05D006536 ORTHO05D005877 3.6e-06 55.5 115 30.4
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 3.6e-06 55.5 119 30.3
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 3.6e-06 55.5 119 29.4
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 4.8e-06 55.1 115 23.5
Sabra02G0106400 Salix brachista HOM05D006536 ORTHO05D005877 6.2e-06 54.7 89 34.8
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.2e-06 54.7 110 30.9
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 8.1e-06 54.3 139 28.8
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 8.1e-06 54.3 104 27.9


User provided reference genes

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