Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g063990.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 0.0e+00 1317.4 816 100.0
Sopen07g032130 Solanum pennellii HOM05D008221 ORTHO05D011984 0.0e+00 1206.8 824 90.9
PGSC0003DMG400040495 Solanum tuberosum HOM05D008221 ORTHO05D011984 6.2e-160 568.9 352 82.4
PGSC0003DMG400047240 Solanum tuberosum HOM05D008221 ORTHO05D011984 4.7e-152 542.7 349 79.7
PGSC0003DMG400044046 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.2e-147 528.1 352 77.3
Sopen05g014840 Solanum pennellii HOM05D008221 ORTHO05D011984 1.1e-135 488.4 353 72.8
PGSC0003DMG400035631 Solanum tuberosum HOM05D008221 ORTHO05D397769 7.4e-89 332.8 463 68.3
Peaxi162Scf01086g00036 Petunia axillaris HOM05D008221 ORTHO05D011890 1.0e-50 206.1 563 30.0
PGSC0003DMG400038922 Solanum tuberosum HOM05D008221 ORTHO05D011984 7.0e-47 193.4 187 61.0
CAN.G162.145 Capsicum annuum HOM05D008221 ORTHO05D011984 1.2e-43 182.6 170 60.0
PGSC0003DMG400019230 Solanum tuberosum HOM05D008221 ORTHO05D011984 7.5e-41 173.3 182 58.2
PGSC0003DMG400044944 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.3e-40 172.6 182 58.2
Solyc07g063980.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 6.4e-40 170.2 177 59.3
CAN.G162.151 Capsicum annuum HOM05D008221 ORTHO05D011984 1.1e-39 169.5 161 57.1
PGSC0003DMG400034432 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.1e-36 159.5 153 57.5
Sopen07g032120 Solanum pennellii HOM05D008221 ORTHO05D011984 2.5e-36 158.3 167 57.5
CAN.G949.6 Capsicum annuum HOM05D008221 ORTHO05D011984 5.6e-36 157.1 141 58.2
PGSC0003DMG400036612 Solanum tuberosum HOM05D008221 ORTHO05D011984 5.6e-36 157.1 238 48.3
Sopen05g014450 Solanum pennellii HOM05D008221 ORTHO05D011984 7.3e-36 156.8 156 56.4
PGSC0003DMG400043085 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.2e-35 156.0 125 68.0
CAN.G162.152 Capsicum annuum HOM05D008221 ORTHO05D011984 2.0e-33 148.7 153 56.2
CAN.G456.9 Capsicum annuum HOM05D008221 ORTHO05D011984 8.3e-32 143.3 152 55.3
PGSC0003DMG400037880 Solanum tuberosum HOM05D008221 ORTHO05D011984 8.3e-32 143.3 123 64.2
Nitab4.5_0002238g0020 Nicotiana tabacum HOM05D008221 ORTHO05D011984 2.4e-31 141.7 141 55.3
CAN.G337.167 Capsicum annuum HOM05D008221 ORTHO05D115420 2.3e-29 135.2 182 41.8
CAN.G337.161 Capsicum annuum HOM05D008221 ORTHO05D114940 1.5e-28 132.5 115 53.0
Nitab4.5_0002238g0050 Nicotiana tabacum HOM05D008221 ORTHO05D011890 8.1e-27 126.7 189 40.2
CAN.G162.149 Capsicum annuum HOM05D008221 ORTHO05D011984 4.0e-26 124.4 104 61.5
Solyc05g018030.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 4.4e-25 120.9 113 58.4
Nitab4.5_0000552g0010 Nicotiana tabacum HOM05D008221 ORTHO05D011984 1.2e-22 112.8 100 58.0
Peaxi162Scf01086g00008 Petunia axillaris HOM05D008221 ORTHO05D011984 2.7e-22 111.7 283 32.2
Peaxi162Scf00459g00810 Petunia axillaris HOM05D008221 ORTHO05D011890 3.5e-22 111.3 183 35.5
Peaxi162Scf00303g00111 Petunia axillaris HOM05D008221 ORTHO05D011890 1.1e-18 99.8 157 40.1
Peaxi162Scf00308g00113 Petunia axillaris HOM05D008221 ORTHO05D011890 6.9e-18 97.1 96 49.0
Peaxi162Scf00363g00084 Petunia axillaris HOM05D008221 ORTHO05D011890 1.2e-17 96.3 157 40.1
Peaxi162Scf00494g00613 Petunia axillaris HOM05D008221 ORTHO05D011890 1.3e-16 92.8 146 39.7
Peaxi162Scf00609g00622 Petunia axillaris HOM05D008221 ORTHO05D011890 2.2e-16 92.0 107 43.0
PGSC0003DMG400045683 Solanum tuberosum HOM05D008221 ORTHO05D010882 8.4e-16 90.1 105 41.9
Peaxi162Scf00151g00052 Petunia axillaris HOM05D008221 ORTHO05D011890 1.1e-15 89.7 141 40.4
Sopen07g031950 Solanum pennellii HOM05D008221 ORTHO05D011890 2.4e-15 88.6 87 48.3
PGSC0003DMG400040419 Solanum tuberosum HOM05D008221 ORTHO05D011890 3.2e-15 88.2 91 46.2
CAN.G337.166 Capsicum annuum HOM05D008221 ORTHO05D011890 1.6e-14 85.9 215 37.7
Solyc07g063840.1 Solanum lycopersicum HOM05D008221 ORTHO05D011890 1.6e-14 85.9 87 47.1
Peaxi162Scf00886g00026 Petunia axillaris HOM05D008221 ORTHO05D011890 6.0e-14 84.0 98 44.9
CAN.G949.4 Capsicum annuum HOM05D008221 ORTHO05D011890 7.8e-14 83.6 96 40.6
Peaxi162Scf04031g00002 Petunia axillaris HOM05D008221 ORTHO05D011890 1.7e-13 82.4 128 38.3
CAN.G162.156 Capsicum annuum HOM05D008221 ORTHO05D011890 3.0e-13 81.6 90 43.3
Peaxi162Scf04031g00008 Petunia axillaris HOM05D008221 ORTHO05D011890 1.1e-12 79.7 73 52.1
PGSC0003DMG400046459 Solanum tuberosum HOM05D008221 ORTHO05D011890 1.1e-12 79.7 91 44.0
CAN.G337.159 Capsicum annuum HOM05D008221 ORTHO05D011890 1.9e-12 79.0 90 42.2
Peaxi162Scf04031g00014 Petunia axillaris HOM05D008221 ORTHO05D011890 3.3e-12 78.2 81 46.9
Peaxi162Scf68011g00001 Petunia axillaris HOM05D008221 ORTHO05D011890 5.6e-12 77.4 88 45.5
CAN.G337.158 Capsicum annuum HOM05D008221 ORTHO05D011890 7.3e-12 77.0 86 39.5
Peaxi162Scf00697g00026 Petunia axillaris HOM05D008221 ORTHO05D011890 4.8e-11 74.3 82 43.9
PGSC0003DMG400042307 Solanum tuberosum HOM05D008221 ORTHO05D395752 4.8e-11 74.3 52 59.6
CAN.G337.160 Capsicum annuum HOM05D008221 ORTHO05D011890 3.1e-10 71.6 154 33.1
PGSC0003DMG400034340 Solanum tuberosum HOM05D008221 ORTHO05D394921 9.0e-10 70.1 89 40.4
PGSC0003DMG400041033 Solanum tuberosum HOM05D008221 ORTHO05D037682 5.8e-09 67.4 101 40.6
PGSC0003DMG400015085 Solanum tuberosum HOM05D008221 ORTHO05D395479 7.6e-09 67.0 259 50.2
Solyc07g064000.1 Solanum lycopersicum HOM05D008221 ORTHO05D037682 1.4e-07 62.8 105 38.1
Sopen07g032140 Solanum pennellii HOM05D008221 ORTHO05D037682 5.4e-07 60.8 105 37.1


User provided reference genes

Program Settings