Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 4.6e-170 601.3 333 100.0
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 6.4e-164 580.9 335 97.0
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 9.3e-147 523.9 312 91.0
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 3.5e-122 442.2 332 72.3
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 6.5e-116 421.4 329 71.4
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 1.2e-106 390.6 335 68.1
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 2.3e-68 263.5 345 52.5
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 1.4e-62 244.2 350 48.6
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 9.5e-59 231.5 336 46.7
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 1.6e-58 230.7 348 48.0
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 1.3e-55 221.1 338 45.9
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 4.1e-54 216.1 359 45.1
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 6.8e-49 198.7 181 63.0
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 8.9e-49 198.4 195 60.5
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 5.8e-48 195.7 340 42.9
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 6.4e-47 192.2 293 46.4
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 5.4e-46 189.1 345 42.6
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 9.2e-46 188.3 303 44.2
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 1.7e-44 184.1 352 42.0
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 6.6e-44 182.2 335 40.0
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 8.6e-44 181.8 352 39.5
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 1.1e-43 181.4 344 38.7
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.1e-43 181.4 348 42.5
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 1.5e-43 181.0 330 41.2
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.5e-43 181.0 352 38.9
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 7.3e-43 178.7 343 42.3
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 9.6e-43 178.3 222 50.0
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 1.2e-42 177.9 351 41.9
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 2.8e-42 176.8 335 41.5
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 6.2e-42 175.6 340 43.2
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 6.2e-42 175.6 350 38.9
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 8.1e-42 175.3 347 39.2
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.4e-41 174.5 335 40.9
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 9.9e-40 168.3 351 38.2
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 9.9e-40 168.3 483 33.5
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 1.3e-39 167.9 345 38.3
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 8.4e-39 165.2 333 39.3
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 1.1e-38 164.9 341 39.0
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 1.9e-38 164.1 343 38.8
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 1.9e-38 164.1 343 38.8
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.9e-38 164.1 347 39.5
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 1.9e-38 164.1 343 39.1
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 3.2e-38 163.3 349 39.3
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 4.2e-38 162.9 332 40.7
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 4.2e-38 162.9 336 37.2
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 7.1e-38 162.2 358 38.3
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 9.3e-38 161.8 346 40.8
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.1e-37 160.6 345 40.3
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 2.7e-37 160.2 337 39.5
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 2.7e-37 160.2 342 37.7
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 2.7e-37 160.2 336 36.6
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 4.6e-37 159.5 341 38.7
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 4.6e-37 159.5 340 36.5
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 7.8e-37 158.7 343 39.4
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 1.0e-36 158.3 239 45.6
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.3e-36 157.9 348 38.8
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 2.3e-36 157.1 118 71.2
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 3.0e-36 156.8 341 39.6
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 5.1e-36 156.0 353 40.2
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 5.1e-36 156.0 344 37.5
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 8.7e-36 155.2 293 39.6
CAN.G777.9 Capsicum annuum HOM05D003841 ORTHO05D004602 8.7e-36 155.2 319 38.9
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 8.7e-36 155.2 347 40.3
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 8.7e-36 155.2 341 40.5
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 1.1e-35 154.8 342 37.4
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.1e-35 154.8 340 38.5
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 3.3e-35 153.3 365 37.5
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 3.3e-35 153.3 338 37.3
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 3.3e-35 153.3 344 39.0
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 7.3e-35 152.1 344 38.7
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 9.6e-35 151.8 344 37.8
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 9.6e-35 151.8 343 37.3
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 1.6e-34 151.0 347 36.6
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 1.6e-34 151.0 342 37.1
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 3.6e-34 149.8 345 39.7
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 4.8e-34 149.4 345 35.7
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 4.8e-34 149.4 332 38.0
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 6.2e-34 149.1 331 38.4
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 6.2e-34 149.1 338 35.2
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 6.2e-34 149.1 345 35.9
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 8.1e-34 148.7 339 41.0
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 2.4e-33 147.1 347 36.6
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 6.9e-33 145.6 344 34.9
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.2e-32 144.8 378 34.4
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.6e-32 143.7 338 35.2
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 4.4e-32 142.9 346 35.8
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 2.2e-31 140.6 349 36.7
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 2.9e-31 140.2 340 36.2
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 4.9e-31 139.4 334 35.9
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 4.9e-31 139.4 339 34.8
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 1.1e-30 138.3 339 35.4
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 2.4e-30 137.1 341 36.7
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.2e-30 136.7 335 34.0
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 3.2e-30 136.7 332 32.2
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 7.1e-30 135.6 338 34.3
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 1.6e-29 134.4 352 35.5
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 2.1e-29 134.0 362 37.0
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 2.1e-29 134.0 340 33.2
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 3.5e-29 133.3 345 33.9
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 4.6e-29 132.9 341 34.6
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 4.6e-29 132.9 357 33.6
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 3.0e-28 130.2 346 32.7
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 2.5e-27 127.1 332 36.4
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 3.3e-27 126.7 349 33.8
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 6.2e-26 122.5 344 34.3
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 8.1e-26 122.1 98 63.3
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 1.8e-25 120.9 266 35.0
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 9.0e-25 118.6 338 32.5
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 2.6e-24 117.1 218 39.9
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 7.6e-24 115.5 268 34.0
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 1.3e-23 114.8 347 34.9
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 2.9e-23 113.6 340 35.3
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 2.9e-23 113.6 275 37.8
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 6.4e-23 112.5 283 39.6
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 1.1e-22 111.7 348 33.3
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.9e-22 110.9 346 32.9
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 4.2e-22 109.8 345 33.3
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 9.3e-22 108.6 336 33.3
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 1.2e-21 108.2 236 35.2
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 7.9e-21 105.5 286 35.7
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 1.0e-20 105.1 338 33.1
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 1.0e-20 105.1 337 32.9
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 1.3e-20 104.8 215 42.3
CAN.G1207.10 Capsicum annuum HOM05D003841 ORTHO05D004602 2.3e-20 104.0 273 32.2
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 2.3e-20 104.0 330 33.6
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 3.0e-20 103.6 242 37.2
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 5.1e-20 102.8 346 34.4
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 1.1e-19 101.7 340 31.5
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 1.5e-19 101.3 352 33.5
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 1.5e-19 101.3 345 32.5
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 1.9e-19 100.9 332 31.6
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 7.4e-19 99.0 335 30.1
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 9.6e-19 98.6 125 49.6
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 9.6e-19 98.6 174 38.5
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 1.3e-18 98.2 341 31.1
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 2.1e-18 97.4 346 30.9
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 3.7e-18 96.7 334 33.8
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 3.7e-18 96.7 254 35.8
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 1.1e-17 95.1 335 31.3
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.4e-17 94.7 268 36.2
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 1.8e-17 94.4 359 34.0
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 9.0e-17 92.0 333 31.8
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.5e-16 91.3 253 36.8
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 3.4e-16 90.1 218 37.2
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 4.5e-16 89.7 232 37.5
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 7.6e-16 89.0 333 32.4
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 1.3e-15 88.2 216 38.4
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 2.2e-15 87.4 225 36.4
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 4.9e-15 86.3 338 27.8
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 3.2e-14 83.6 271 29.2
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 4.2e-14 83.2 349 30.1
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 1.2e-13 81.6 243 31.3
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 2.1e-13 80.9 195 41.0
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 3.0e-12 77.0 258 29.5
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 3.9e-12 76.6 236 33.5
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 3.9e-12 76.6 331 29.6
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.1e-11 75.1 178 33.7
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 1.5e-11 74.7 282 27.7
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 2.5e-11 73.9 169 33.1
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 7.4e-11 72.4 348 28.7
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 9.6e-11 72.0 112 43.8
CsaV3_3G005690 Cucumis sativus L. HOM05D003841 ORTHO05D004602 3.7e-10 70.1 168 33.9
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 6.2e-10 69.3 208 32.2
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 1.1e-09 68.6 328 26.8
Cpa.g.c47761 Carica papaya HOM05D003841 ORTHO05D004602 6.9e-09 65.9 129 41.1
Phvul.005G089400 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 9.0e-09 65.5 72 47.2
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 1.2e-08 65.1 332 25.6
VMungo1027G0001 Vigna mungo HOM05D003841 ORTHO05D004602 1.5e-08 64.7 208 31.7
CAN.G526.7 Capsicum annuum HOM05D009195 ORTHO05D000137 1.0e-07 62.0 41 75.6
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 3.8e-07 60.1 354 26.6
Zm00001eb186540 Zea mays HOM05D002766 ORTHO05D002809 5.0e-07 59.7 130 34.6
Zm00001eb249490 Zea mays HOM05D002766 ORTHO05D002809 5.0e-07 59.7 147 32.0
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 8.4e-07 58.9 356 26.1
Pp3c17_23830 Physcomitrium patens HOM05D039964 ORTHO05D002809 7.2e-06 55.8 390 26.4


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