Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g063840.1 Solanum lycopersicum HOM05D008221 ORTHO05D011890 2.1e-61 239.2 157 100.0
Sopen07g031950 Solanum pennellii HOM05D008221 ORTHO05D011890 1.8e-55 219.5 157 74.5
PGSC0003DMG400040419 Solanum tuberosum HOM05D008221 ORTHO05D011890 1.1e-44 183.7 185 56.2
PGSC0003DMG400046459 Solanum tuberosum HOM05D008221 ORTHO05D011890 2.0e-38 162.9 193 52.3
CAN.G337.166 Capsicum annuum HOM05D008221 ORTHO05D011890 3.7e-21 105.5 88 50.0
Nitab4.5_0002238g0050 Nicotiana tabacum HOM05D008221 ORTHO05D011890 3.7e-21 105.5 87 55.2
PGSC0003DMG400045683 Solanum tuberosum HOM05D008221 ORTHO05D010882 1.1e-20 104.0 88 48.9
CAN.G949.4 Capsicum annuum HOM05D008221 ORTHO05D011890 2.4e-20 102.8 85 51.8
CAN.G162.156 Capsicum annuum HOM05D008221 ORTHO05D011890 2.3e-18 96.3 85 49.4
CAN.G337.159 Capsicum annuum HOM05D008221 ORTHO05D011890 2.3e-18 96.3 85 49.4
CAN.G337.161 Capsicum annuum HOM05D008221 ORTHO05D114940 1.9e-17 93.2 88 46.6
CAN.G337.158 Capsicum annuum HOM05D008221 ORTHO05D011890 4.2e-17 92.0 81 45.7
CAN.G337.167 Capsicum annuum HOM05D008221 ORTHO05D115420 5.5e-17 91.7 88 46.6
PGSC0003DMG400035631 Solanum tuberosum HOM05D008221 ORTHO05D397769 5.5e-17 91.7 88 48.9
Sopen07g032130 Solanum pennellii HOM05D008221 ORTHO05D011984 1.2e-16 90.5 88 47.7
Solyc07g063990.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 2.1e-16 89.7 87 47.1
Peaxi162Scf01086g00036 Petunia axillaris HOM05D008221 ORTHO05D011890 8.0e-16 87.8 85 50.6
Peaxi162Scf00459g00810 Petunia axillaris HOM05D008221 ORTHO05D011890 4.0e-15 85.5 88 47.7
Peaxi162Scf00308g00113 Petunia axillaris HOM05D008221 ORTHO05D011890 1.5e-14 83.6 87 44.8
Nitab4.5_0002238g0020 Nicotiana tabacum HOM05D008221 ORTHO05D011984 7.5e-14 81.3 90 44.4
Peaxi162Scf00303g00111 Petunia axillaris HOM05D008221 ORTHO05D011890 9.8e-14 80.9 87 42.5
PGSC0003DMG400034340 Solanum tuberosum HOM05D008221 ORTHO05D394921 1.7e-13 80.1 81 43.2
Peaxi162Scf00363g00084 Petunia axillaris HOM05D008221 ORTHO05D011890 2.8e-13 79.3 87 43.7
Peaxi162Scf00609g00622 Petunia axillaris HOM05D008221 ORTHO05D011890 4.9e-13 78.6 87 43.7
Sopen07g032140 Solanum pennellii HOM05D008221 ORTHO05D037682 8.3e-13 77.8 86 46.5
Solyc07g064000.1 Solanum lycopersicum HOM05D008221 ORTHO05D037682 1.1e-12 77.4 85 47.1
Peaxi162Scf00494g00613 Petunia axillaris HOM05D008221 ORTHO05D011890 1.8e-12 76.6 87 42.5
CAN.G337.160 Capsicum annuum HOM05D008221 ORTHO05D011890 2.4e-12 76.3 68 47.1
Peaxi162Scf04031g00002 Petunia axillaris HOM05D008221 ORTHO05D011890 5.4e-12 75.1 87 41.4
PGSC0003DMG400041033 Solanum tuberosum HOM05D008221 ORTHO05D037682 9.2e-12 74.3 85 44.7
Peaxi162Scf00151g00052 Petunia axillaris HOM05D008221 ORTHO05D011890 1.2e-11 73.9 81 45.7
Peaxi162Scf00886g00026 Petunia axillaris HOM05D008221 ORTHO05D011890 2.7e-11 72.8 87 40.2
Sopen07g032120 Solanum pennellii HOM05D008221 ORTHO05D011984 2.3e-10 69.7 87 42.5
PGSC0003DMG400040495 Solanum tuberosum HOM05D008221 ORTHO05D011984 3.8e-10 68.9 89 42.7
Solyc07g063980.1 Solanum lycopersicum HOM05D008221 ORTHO05D011984 8.6e-10 67.8 87 41.4
Peaxi162Scf04031g00014 Petunia axillaris HOM05D008221 ORTHO05D011890 1.5e-09 67.0 75 41.3
PGSC0003DMG400038922 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.5e-09 67.0 87 40.2
Peaxi162Scf04031g00008 Petunia axillaris HOM05D008221 ORTHO05D011890 2.5e-09 66.2 75 41.3
PGSC0003DMG400019230 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.5e-09 66.2 87 40.2
PGSC0003DMG400044944 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.5e-09 66.2 87 40.2
PGSC0003DMG400034432 Solanum tuberosum HOM05D008221 ORTHO05D011984 3.3e-09 65.9 90 40.0
Sopen05g014450 Solanum pennellii HOM05D008221 ORTHO05D011984 4.3e-09 65.5 89 41.6
PGSC0003DMG400044046 Solanum tuberosum HOM05D008221 ORTHO05D011984 5.6e-09 65.1 87 41.4
PGSC0003DMG400043085 Solanum tuberosum HOM05D008221 ORTHO05D011984 1.2e-08 63.9 87 39.1
Peaxi162Scf68011g00001 Petunia axillaris HOM05D008221 ORTHO05D011890 1.6e-08 63.5 71 42.3
Sopen05g014840 Solanum pennellii HOM05D008221 ORTHO05D011984 1.6e-08 63.5 154 34.4
PGSC0003DMG400047240 Solanum tuberosum HOM05D008221 ORTHO05D011984 6.1e-08 61.6 89 39.3
CAN.G162.145 Capsicum annuum HOM05D008221 ORTHO05D011984 8.0e-08 61.2 91 34.1
Peaxi162Scf00697g00026 Petunia axillaris HOM05D008221 ORTHO05D011890 1.4e-07 60.5 61 44.3
Peaxi162Scf01086g00008 Petunia axillaris HOM05D008221 ORTHO05D011984 4.0e-07 58.9 87 37.9
Duzib248G0414 Durio zibethinus HOM05D000538 ORTHO05D000614 8.9e-07 57.8 87 36.8
PGSC0003DMG400037880 Solanum tuberosum HOM05D008221 ORTHO05D011984 2.0e-06 56.6 85 37.6
Aa31LG5G23590 Aethionema arabicum HOM05D008078 ORTHO05D010263 2.6e-06 56.2 89 38.2
CAN.G162.151 Capsicum annuum HOM05D008221 ORTHO05D011984 2.6e-06 56.2 91 30.8
Dinv22316 Davidia involucrata HOM05D000359 ORTHO05D000251 3.4e-06 55.8 84 34.5
QL08p034081 Quercus lobata HOM05D000538 ORTHO05D000614 7.5e-06 54.7 87 34.5


User provided reference genes

Program Settings