Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 5.1e-145 517.7 254 100.0
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 7.4e-104 380.9 262 73.3
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 6.5e-92 341.3 242 72.7
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 6.5e-92 341.3 170 99.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 4.5e-85 318.5 257 62.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 4.7e-82 308.5 257 61.5
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 9.7e-80 300.8 258 58.9
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.0e-77 293.1 256 58.2
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 3.5e-77 292.4 256 57.8
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 3.8e-76 288.9 227 62.6
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 3.6e-74 282.3 258 58.9
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.3e-71 273.9 257 56.4
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 2.2e-71 273.1 263 55.9
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.8e-71 272.7 258 57.4
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.7e-71 272.3 209 65.1
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 8.3e-71 271.2 240 63.3
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 8.3e-71 271.2 266 53.8
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.4e-70 270.4 215 64.2
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 2.0e-69 266.5 256 56.2
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 2.7e-69 266.2 258 55.0
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 2.7e-69 266.2 261 52.5
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 4.5e-69 265.4 256 53.5
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 5.9e-69 265.0 257 56.4
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.7e-68 263.5 240 56.2
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.0e-68 261.9 257 54.9
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 2.5e-67 259.6 263 54.0
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 2.5e-67 259.6 265 53.2
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 4.2e-67 258.8 226 58.0
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 2.7e-66 256.1 257 53.3
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 6.1e-66 255.0 259 53.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.0e-65 254.2 259 52.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.4e-65 253.8 254 52.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.4e-65 253.8 256 55.1
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.3e-65 253.1 194 62.9
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 3.0e-65 252.7 256 53.5
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 3.0e-65 252.7 242 54.5
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 4.0e-65 252.3 237 55.3
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 5.2e-65 251.9 258 54.7
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.2e-64 250.8 260 53.8
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.2e-64 250.8 184 65.8
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.5e-64 250.4 252 52.8
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.4e-64 249.2 265 50.2
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 3.4e-64 249.2 256 53.9
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 7.5e-64 248.1 262 51.9
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 2.2e-63 246.5 174 69.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 4.9e-63 245.4 259 51.7
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.8e-62 243.4 246 55.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-62 243.4 257 51.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.8e-62 243.4 260 50.0
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 3.1e-62 242.7 209 59.8
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 7.0e-62 241.5 246 54.9
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.2e-61 240.7 288 47.9
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.0e-61 240.0 184 64.1
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.0e-61 240.0 241 54.8
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.7e-61 239.6 246 54.5
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 2.7e-61 239.6 223 57.0
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.7e-61 239.6 288 47.9
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 3.5e-61 239.2 231 56.7
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 3.5e-61 239.2 231 56.7
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 5.9e-61 238.4 264 51.9
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.7e-60 236.9 268 47.4
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.7e-60 236.9 223 55.2
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.8e-60 235.7 259 51.4
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.8e-60 235.7 256 48.4
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 5.0e-60 235.3 148 71.6
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 6.6e-60 235.0 190 62.6
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 8.6e-60 234.6 148 72.3
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.5e-59 233.8 271 47.2
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.9e-59 233.4 238 54.2
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.3e-59 232.6 192 59.9
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 3.3e-59 232.6 261 51.7
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 9.5e-59 231.1 184 64.7
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.2e-58 230.7 230 54.8
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 2.1e-58 229.9 190 61.6
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.6e-58 229.2 211 55.5
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.7e-58 228.8 258 50.8
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 6.1e-58 228.4 179 64.2
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.0e-57 226.1 194 60.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 7.5e-56 221.5 141 74.5
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 9.8e-56 221.1 163 65.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.3e-55 220.7 205 56.1
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 4.9e-55 218.8 151 71.5
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 5.4e-54 215.3 125 76.8
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.6e-53 213.8 353 38.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.0e-52 209.5 173 61.8
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.2e-50 204.1 145 63.4
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 3.1e-49 199.5 232 45.7
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 4.0e-49 199.1 240 48.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.2e-48 197.6 259 47.5
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 9.8e-48 194.5 210 49.0
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.6e-45 187.2 89 97.8
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.3e-44 184.1 206 49.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 7.3e-43 178.3 174 55.2
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 1.6e-42 177.2 148 60.8
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.8e-42 176.4 208 48.1
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.1e-41 174.5 286 40.2
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.8e-41 173.7 158 56.3
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 6.8e-41 171.8 143 62.2
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 2.2e-39 166.8 110 72.7
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.9e-38 163.7 211 45.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.9e-38 163.7 211 45.0
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.4e-38 163.3 216 43.5
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 4.7e-34 149.1 104 66.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.5e-32 144.1 174 46.6
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 7.6e-32 141.7 82 75.6
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 9.2e-30 134.8 158 43.0
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.2e-26 124.4 171 43.9
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 2.1e-26 123.6 88 69.3
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 6.2e-26 122.1 147 42.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 4.6e-21 105.9 87 60.9
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 9.9e-16 88.2 146 39.7
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.6e-11 71.6 55 72.7
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 6.9e-09 65.5 82 46.3
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 7.6e-08 62.0 92 44.6
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 1.1e-06 58.2 79 40.5


User provided reference genes

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