Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.7e-73 279.3 141 100.0
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.6e-71 272.7 141 96.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 7.8e-71 270.4 141 96.5
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.0e-54 215.3 142 79.6
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.3e-53 211.8 142 77.5
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 4.8e-52 208.0 145 75.9
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 5.3e-51 204.5 141 75.2
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 3.4e-42 175.3 120 74.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 5.8e-42 174.5 141 66.0
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.8e-41 171.8 125 71.2
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 4.9e-41 171.4 143 66.4
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 6.5e-41 171.0 122 70.5
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 8.4e-41 170.6 104 77.9
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 8.4e-41 170.6 105 80.0
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.1e-40 170.2 124 69.4
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.1e-40 170.2 122 68.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.1e-40 170.2 145 62.8
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.9e-40 169.5 105 77.1
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.5e-40 169.1 133 66.9
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 7.1e-40 167.5 122 71.3
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-39 166.8 105 76.2
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-39 166.8 105 76.2
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.2e-39 166.8 133 66.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 2.1e-39 166.0 102 78.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.1e-39 166.0 104 75.0
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.6e-39 164.9 106 77.4
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.6e-39 164.9 145 60.0
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 1.0e-38 163.7 113 71.7
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.0e-38 163.7 105 74.3
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 1.3e-38 163.3 106 74.5
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.8e-38 162.9 109 73.4
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.3e-38 162.5 98 81.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.3e-38 162.5 104 70.2
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 3.0e-38 162.2 147 61.9
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 3.9e-38 161.8 106 73.6
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 8.7e-38 160.6 106 74.5
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 8.7e-38 160.6 143 60.8
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 8.7e-38 160.6 144 57.6
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.1e-37 160.2 124 65.3
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.1e-37 160.2 99 76.8
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.1e-37 160.2 106 72.6
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.5e-37 159.8 102 73.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.9e-37 159.5 121 71.9
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 2.5e-37 159.1 129 60.5
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.5e-37 159.1 147 61.2
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 3.3e-37 158.7 130 60.0
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.3e-37 158.7 130 59.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.3e-37 158.7 102 74.5
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 4.3e-37 158.3 96 76.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 9.6e-37 157.1 103 72.8
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.6e-36 156.4 104 72.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 2.1e-36 156.0 99 75.8
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.8e-36 155.6 99 74.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 3.7e-36 155.2 119 68.1
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 3.7e-36 155.2 111 72.1
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 6.3e-36 154.5 141 60.3
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 8.2e-36 154.1 104 74.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.1e-35 153.7 102 70.6
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 4.1e-35 151.8 98 74.5
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 4.1e-35 151.8 99 71.7
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 6.9e-35 151.0 120 63.3
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 105 69.5
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.2e-34 150.2 105 72.4
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 4.5e-34 148.3 143 55.2
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 7.6e-34 147.5 100 71.0
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.3e-33 146.7 98 71.4
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.7e-33 146.4 111 68.5
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.9e-33 145.6 105 67.6
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 3.8e-33 145.2 108 66.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 3.8e-33 145.2 98 71.4
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 3.8e-33 145.2 98 71.4
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 3.8e-33 145.2 98 71.4
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 8.5e-33 144.1 146 55.5
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.1e-32 143.7 135 54.1
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.4e-32 143.3 139 53.2
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.4e-32 143.3 98 70.4
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.4e-32 143.3 120 60.0
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.4e-32 143.3 169 46.7
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 1.9e-32 142.9 114 61.4
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.9e-32 142.9 121 60.3
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 7.2e-32 141.0 128 55.5
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 9.3e-32 140.6 128 55.5
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 9.3e-32 140.6 97 70.1
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.2e-31 140.2 122 58.2
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.1e-31 139.4 121 60.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 3.6e-31 138.7 128 54.7
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 4.6e-31 138.3 115 60.0
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 7.9e-31 137.5 132 57.6
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.0e-30 137.1 104 61.5
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.8e-30 136.3 104 61.5
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 3.9e-30 135.2 93 67.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.9e-30 135.2 133 54.9
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 3.9e-30 135.2 104 61.5
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 6.7e-30 134.4 127 54.3
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 6.7e-30 134.4 119 57.1
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.1e-29 133.7 196 41.3
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 2.5e-29 132.5 98 65.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 7.4e-29 131.0 93 65.6
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 7.4e-29 131.0 101 58.4
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.3e-28 130.2 96 64.6
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.6e-28 129.8 92 67.4
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 4.8e-28 128.3 145 47.6
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.3e-25 120.2 115 58.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.2e-25 119.4 77 74.0
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 5.0e-25 118.2 103 55.3
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 5.5e-24 114.8 81 72.8
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.6e-23 113.2 200 38.0
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 3.0e-22 109.0 105 56.2
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.5e-21 106.7 77 75.3
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 7.4e-21 104.4 61 78.7
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.2e-20 102.8 64 76.6
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 2.8e-20 102.4 96 52.1
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 2.4e-19 99.4 109 55.0
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 5.3e-19 98.2 102 47.1
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 5.5e-16 88.2 106 41.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 1.6e-15 86.7 99 38.4
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 6.1e-15 84.7 96 43.8
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 3.9e-14 82.0 57 68.4
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 2.0e-10 69.7 95 40.0
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 8.5e-09 64.3 42 66.7
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 3.2e-08 62.4 96 34.4
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.6e-07 60.1 126 36.5


User provided reference genes

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