Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 7.4e-101 370.5 188 100.0
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 5.1e-94 347.8 177 98.3
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.2e-69 266.9 177 78.0
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 5.7e-69 264.6 177 76.3
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 2.8e-68 262.3 153 83.7
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.2e-63 246.9 177 73.4
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 2.1e-63 246.1 151 82.1
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 1.2e-58 230.3 187 66.3
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 4.5e-58 228.4 228 57.5
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 7.3e-56 221.1 177 66.1
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 4.7e-55 218.4 178 63.5
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.4e-54 216.9 175 65.1
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 4.0e-54 215.3 182 63.2
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 4.4e-53 211.8 185 62.7
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 5.4e-51 204.9 149 70.5
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 9.2e-51 204.1 137 74.5
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 1.2e-50 203.8 164 64.6
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 5.9e-50 201.4 158 65.8
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 6.6e-49 198.0 188 58.0
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 1.5e-48 196.8 166 63.9
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 1.9e-48 196.4 188 57.4
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 4.3e-48 195.3 149 65.1
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 7.3e-48 194.5 167 61.1
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.1e-47 193.0 167 58.7
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.1e-46 190.7 167 59.3
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 1.1e-46 190.7 167 59.3
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 1.8e-46 189.9 135 72.6
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 2.3e-46 189.5 154 64.3
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 8.9e-46 187.6 180 61.1
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 2.6e-45 186.0 166 57.2
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 9.8e-45 184.1 145 66.2
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 4.9e-44 181.8 160 60.6
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 6.4e-44 181.4 157 61.1
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 7.8e-42 174.5 140 66.4
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 3.5e-34 149.1 139 59.7
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 3.6e-31 139.0 137 51.1
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 6.2e-31 138.3 139 50.4
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 8.1e-31 137.9 156 46.8
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 1.4e-30 137.1 156 48.1
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 5.2e-30 135.2 141 48.9
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 9.9e-29 131.0 136 50.7
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.1e-27 127.5 135 48.9
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.1e-27 127.5 135 46.7
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.2e-26 124.0 89 68.5
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 4.6e-26 122.1 88 65.9
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.2e-21 107.5 134 44.8
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 3.4e-21 105.9 80 66.2
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 6.0e-18 95.1 56 80.4
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 9.6e-16 87.8 69 68.1
RcHm_v2.0_Chr5g0030641 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-10 70.5 67 55.2
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 1.3e-09 67.4 73 46.6


User provided reference genes

Program Settings