Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 4.5e-92 341.3 174 100.0
PGSC0003DMG400041185 Solanum tuberosum HOM05D001461 ORTHO05D051078 7.5e-31 137.9 105 72.4
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 1.3e-14 84.0 72 63.9
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.3e-14 84.0 72 63.9
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.7e-14 82.4 72 61.1
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 4.9e-14 82.0 72 61.1
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 4.9e-14 82.0 72 61.1
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 4.9e-14 82.0 72 61.1
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 8.3e-14 81.3 72 61.1
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 2.4e-13 79.7 72 55.6
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 3.2e-13 79.3 72 56.9
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 4.1e-13 79.0 72 54.2
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 5.4e-13 78.6 72 54.2
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 5.4e-13 78.6 72 54.2
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 5.4e-13 78.6 72 55.6
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 9.2e-13 77.8 70 55.7
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 1.2e-12 77.4 72 54.2
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.6e-12 77.0 72 54.2
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 2.0e-12 76.6 70 54.3
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 52.8
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 2.7e-12 76.3 72 54.2
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.5e-12 75.9 72 54.2
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.5e-12 75.9 72 54.2
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 3.5e-12 75.9 70 54.3
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 3.5e-12 75.9 70 54.3
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 4.6e-12 75.5 70 54.3
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 4.6e-12 75.5 70 51.4
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 4.6e-12 75.5 72 52.8
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 6.0e-12 75.1 72 52.8
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 6.0e-12 75.1 70 54.3
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 6.0e-12 75.1 70 51.4
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 6.0e-12 75.1 72 54.2
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 7.8e-12 74.7 72 51.4
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 7.8e-12 74.7 72 52.8
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 7.8e-12 74.7 70 52.9
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 7.8e-12 74.7 72 54.2
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 7.8e-12 74.7 72 51.4
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 7.8e-12 74.7 72 52.8
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 7.8e-12 74.7 72 52.8
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 1.0e-11 74.3 69 52.2
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.0e-11 74.3 72 52.8
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 1.3e-11 73.9 70 51.4
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.3e-11 73.9 70 51.4
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 1.3e-11 73.9 69 55.1
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 1.3e-11 73.9 72 50.0
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 50.0
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 51.4
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 1.7e-11 73.6 72 51.4
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 51.4
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.7e-11 73.6 71 52.1
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 52.8
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 52.8
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 52.8
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 1.7e-11 73.6 72 51.4
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 2.3e-11 73.2 72 52.8
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 2.3e-11 73.2 70 52.9
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 2.3e-11 73.2 72 52.8
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 2.3e-11 73.2 70 51.4
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 2.3e-11 73.2 70 51.4
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 3.0e-11 72.8 70 52.9
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 3.0e-11 72.8 72 50.0
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 3.0e-11 72.8 72 50.0
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 3.0e-11 72.8 72 50.0
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 3.0e-11 72.8 70 50.0
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 3.0e-11 72.8 72 51.4
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 3.9e-11 72.4 72 51.4
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 3.9e-11 72.4 70 48.6
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 3.9e-11 72.4 70 51.4
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 3.9e-11 72.4 72 50.0
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 3.9e-11 72.4 72 51.4
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 5.0e-11 72.0 72 51.4
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 6.6e-11 71.6 72 50.0
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 6.6e-11 71.6 72 50.0
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 6.6e-11 71.6 70 48.6
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 6.6e-11 71.6 70 50.0
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 8.6e-11 71.2 72 51.4
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 8.6e-11 71.2 72 50.0
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 1.1e-10 70.9 72 50.0
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 1.1e-10 70.9 70 50.0
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 1.1e-10 70.9 70 50.0
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 1.1e-10 70.9 72 50.0
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 1.1e-10 70.9 72 48.6
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 1.1e-10 70.9 72 48.6
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 1.1e-10 70.9 70 48.6
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 1.5e-10 70.5 72 50.0
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 1.5e-10 70.5 70 50.0
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 2.5e-10 69.7 72 48.6
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 2.5e-10 69.7 72 48.6
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 3.3e-10 69.3 72 52.8
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 3.3e-10 69.3 72 47.2
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 3.3e-10 69.3 72 47.2
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 4.3e-10 68.9 72 48.6
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 4.3e-10 68.9 72 48.6
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 4.3e-10 68.9 71 50.7
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 4.3e-10 68.9 67 50.7
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 47.2
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 47.2
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 47.2
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 47.2
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 47.2
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 5.6e-10 68.6 72 48.6
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 5.6e-10 68.6 70 48.6
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 7.3e-10 68.2 72 47.2
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 7.3e-10 68.2 72 47.2
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 7.3e-10 68.2 72 47.2
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 9.5e-10 67.8 72 48.6
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 1.2e-09 67.4 72 45.8
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 1.2e-09 67.4 72 45.8
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 1.2e-09 67.4 72 45.8
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.2e-09 67.4 70 51.4
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-09 67.0 72 45.8
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-09 67.0 72 45.8
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 1.6e-09 67.0 72 45.8
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.6e-09 67.0 72 45.8
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 2.8e-09 66.2 72 44.4
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 3.6e-09 65.9 72 45.8
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 3.6e-09 65.9 72 48.6
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 6.2e-09 65.1 72 48.6
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 6.2e-09 65.1 70 44.3
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 6.2e-09 65.1 71 45.1
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 1.4e-08 63.9 68 48.5
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 1.8e-08 63.5 66 47.0
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 4.0e-08 62.4 72 44.4
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 5.2e-08 62.0 29 96.6
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 5.2e-08 62.0 29 96.6
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 5.2e-08 62.0 72 44.4
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 3.4e-07 59.3 71 42.3
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 5.8e-07 58.5 69 42.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.3e-06 57.4 29 82.8
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 2.2e-06 56.6 71 43.7
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.2e-06 56.6 29 79.3
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 2.2e-06 56.6 29 86.2
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.2e-06 56.6 29 82.8
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 8.3e-06 54.7 40 65.0
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 8.3e-06 54.7 40 65.0


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