Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g056325.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.8e-61 236.9 115 100.0
Sopen07g029960 Solanum pennellii HOM05D000111 ORTHO05D001334 2.4e-57 225.3 115 96.5
Solyc07g056708.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.6e-50 202.6 114 84.2
Sopen07g030060 Solanum pennellii HOM05D000111 ORTHO05D001334 1.6e-50 202.6 114 84.2
Solyc07g056704.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.8e-49 199.1 114 82.5
Solyc07g056705.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.8e-49 199.1 114 82.5
Solyc07g056706.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.8e-49 199.1 114 82.5
Solyc07g061710.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.0e-48 195.7 115 84.3
Solyc07g056701.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.3e-47 193.0 114 81.6
Solyc07g056610.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.5e-45 184.9 114 82.5
Nitab4.5_0000045g0310 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.8e-40 167.5 114 72.8
Solyc07g056690.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.1e-37 159.1 114 71.9
Sopen07g030050 Solanum pennellii HOM05D000111 ORTHO05D001334 2.7e-37 158.7 114 70.2
PGSC0003DMG400040163 Solanum tuberosum HOM05D000111 ORTHO05D001334 2.3e-36 155.6 114 69.3
Sopen07g030030 Solanum pennellii HOM05D003098 ORTHO05D001334 3.9e-36 154.8 86 88.4
PGSC0003DMG400003064 Solanum tuberosum HOM05D000111 ORTHO05D001334 3.3e-35 151.8 114 66.7
Sopen08g023480 Solanum pennellii HOM05D000111 ORTHO05D001334 1.8e-33 146.0 115 65.2
Solyc08g074870.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 6.9e-33 144.1 115 64.3
Peaxi162Scf01333g00015 Petunia axillaris HOM05D000111 ORTHO05D001334 7.6e-32 140.6 114 57.9
Sopen08g029340 Solanum pennellii HOM05D000111 ORTHO05D001334 1.3e-31 139.8 115 61.7
Peaxi162Scf01062g00004 Petunia axillaris HOM05D000111 ORTHO05D001334 1.7e-31 139.4 130 58.5
Peaxi162Scf00517g10028 Petunia axillaris HOM05D000111 ORTHO05D001334 2.5e-30 135.6 107 64.5
Peaxi162Scf00935g00035 Petunia axillaris HOM05D000111 ORTHO05D001334 2.5e-30 135.6 113 61.9
Nitab4.5_0010181g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.5e-30 134.4 128 59.4
Nitab4.5_0010546g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.5e-30 134.4 112 60.7
Peaxi162Scf00160g00039 Petunia axillaris HOM05D000111 ORTHO05D001334 9.3e-30 133.7 114 59.6
Solyc08g080810.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.6e-29 132.9 115 58.3
Solyc08g080820.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.6e-29 132.9 115 60.0
Sopen08g029120 Solanum pennellii HOM05D000111 ORTHO05D001334 1.6e-29 132.9 115 60.0
PGSC0003DMG400012220 Solanum tuberosum HOM05D000111 ORTHO05D001334 1.3e-28 129.8 115 58.3
Nitab4.5_0005621g0160 Nicotiana tabacum HOM05D000111 ORTHO05D001334 8.7e-28 127.1 114 54.4
Solyc08g080800.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.5e-27 125.6 116 58.6
Nitab4.5_0007246g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.4e-27 124.0 114 54.4
Sopen08g029140 Solanum pennellii HOM05D000111 ORTHO05D001334 8.2e-26 120.6 115 56.5
Nitab4.5_0000528g0060 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.8e-25 119.4 114 54.4
Peaxi162Scf00119g00418 Petunia axillaris HOM05D000111 ORTHO05D001334 3.1e-25 118.6 114 52.6
Nitab4.5_0002270g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.2e-24 116.7 114 50.0
Solyc08g080790.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.5e-24 116.3 115 54.8
Nitab4.5_0002270g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.6e-24 115.5 114 53.5
Peaxi162Scf00418g01019 Petunia axillaris HOM05D000111 ORTHO05D001334 2.6e-24 115.5 114 55.3
Nitab4.5_0012562g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.5e-24 114.8 114 51.8
Nitab4.5_0000395g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.9e-24 114.4 100 57.0
Peaxi162Scf00119g00413 Petunia axillaris HOM05D000111 ORTHO05D001334 5.9e-24 114.4 114 53.5
Nitab4.5_0001356g0120 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.6e-24 114.0 115 51.3
Solyc08g080745.2 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.1e-22 110.2 112 52.7
Sopen08g029060 Solanum pennellii HOM05D000111 ORTHO05D001334 1.1e-22 110.2 112 52.7
Nitab4.5_0026316g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.9e-22 109.4 114 54.4
Peaxi162Scf00015g01213 Petunia axillaris HOM05D000111 ORTHO05D001334 4.2e-22 108.2 114 50.0
PGSC0003DMG400015705 Solanum tuberosum HOM05D000111 ORTHO05D001334 5.5e-22 107.8 112 53.6
Nitab4.5_0006042g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.2e-22 107.5 114 50.9
Peaxi162Scf00002g01414 Petunia axillaris HOM05D000111 ORTHO05D001334 1.6e-21 106.3 120 50.0
Peaxi162Scf00002g01513 Petunia axillaris HOM05D000111 ORTHO05D001334 1.3e-20 103.2 114 50.9
Nitab4.5_0005621g0200 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.8e-20 102.8 114 49.1
Peaxi162Scf00002g01320 Petunia axillaris HOM05D000111 ORTHO05D001334 3.0e-20 102.1 115 51.3
Nitab4.5_0000528g0070 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.1e-20 101.3 114 46.5
PGSC0003DMG400040786 Solanum tuberosum HOM05D000111 ORTHO05D001334 5.1e-20 101.3 112 47.3
Peaxi162Scf00002g01219 Petunia axillaris HOM05D000111 ORTHO05D001334 1.1e-19 100.1 127 44.9
Peaxi162Scf00002g01317 Petunia axillaris HOM05D000111 ORTHO05D001334 1.1e-19 100.1 114 47.4
Peaxi162Scf00002g01715 Petunia axillaris HOM05D000111 ORTHO05D001334 1.1e-19 100.1 113 49.6
Peaxi162Scf00002g01719 Petunia axillaris HOM05D000111 ORTHO05D001334 1.9e-19 99.4 112 50.9
Nitab4.5_0005621g0130 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.3e-19 98.6 112 47.3
Nitab4.5_0004893g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.4e-19 97.4 114 46.5
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.7e-19 97.1 115 44.3
Peaxi162Scf00119g00316 Petunia axillaris HOM05D000111 ORTHO05D001334 1.3e-18 96.7 107 47.7
Nitab4.5_0000528g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-18 95.9 85 60.0
Nitab4.5_0005621g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.7e-18 95.1 114 47.4
Peaxi162Scf00119g00315 Petunia axillaris HOM05D000111 ORTHO05D001334 4.8e-18 94.7 107 47.7
Nitab4.5_0005621g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-17 93.6 114 48.2
Peaxi162Scf00002g01319 Petunia axillaris HOM05D000111 ORTHO05D001334 1.1e-17 93.6 114 46.5
Peaxi162Scf00002g01816 Petunia axillaris HOM05D000111 ORTHO05D001334 2.4e-17 92.4 113 46.9
Nitab4.5_0000419g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.3e-17 91.3 116 45.7
Nitab4.5_0000528g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.0e-17 90.5 91 53.8
Nitab4.5_0000612g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.2e-16 90.1 118 44.9
PGSC0003DMG400037984 Solanum tuberosum HOM05D000004 ORTHO05D000002 3.4e-16 88.6 112 47.3
PGSC0003DMG400042339 Solanum tuberosum HOM05D000111 ORTHO05D001334 7.7e-16 87.4 91 46.2
Peaxi162Scf00995g00329 Petunia axillaris HOM05D000111 ORTHO05D001334 1.0e-15 87.0 77 58.4
Nitab4.5_0001356g0160 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-15 85.9 112 44.6
Nitab4.5_0006136g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-15 85.9 125 37.6
Nitab4.5_0002331g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.9e-14 82.8 114 43.9
Solyc07g150150.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.9e-14 82.8 48 81.2
Peaxi162Scf00119g00411 Petunia axillaris HOM05D000111 ORTHO05D001334 7.2e-14 80.9 114 39.5
PGSC0003DMG400035865 Solanum tuberosum HOM05D000111 ORTHO05D001334 7.2e-14 80.9 120 40.0
Nitab4.5_0005621g0080 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.6e-13 78.6 98 40.8
Peaxi162Scf00792g00019 Petunia axillaris HOM05D000111 ORTHO05D001334 3.6e-13 78.6 88 45.5
Peaxi162Scf01409g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 3.6e-13 78.6 115 42.6
Sopen09g036390 Solanum pennellii HOM05D000253 ORTHO05D000149 1.0e-12 77.0 107 41.1
Nitab4.5_0002908g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.3e-12 75.9 87 44.8
Peaxi162Scf00213g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 3.0e-12 75.5 112 40.2
Solyc08g080710.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.9e-12 75.1 120 41.7
Sopen08g029010 Solanum pennellii HOM05D000111 ORTHO05D001334 5.1e-12 74.7 120 40.0
Peaxi162Scf00302g01424 Petunia axillaris HOM05D000111 ORTHO05D001334 1.5e-11 73.2 113 41.6
Peaxi162Scf01409g00017 Petunia axillaris HOM05D000111 ORTHO05D001334 5.7e-11 71.2 116 38.8
Solyc09g098470.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.4e-11 70.9 120 36.7
Nitab4.5_0000333g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.7e-11 70.5 114 37.7
Peaxi162Scf01206g00025 Petunia axillaris HOM05D000111 ORTHO05D001334 1.7e-10 69.7 81 46.9
Sopen08g022610 Solanum pennellii HOM05D000111 ORTHO05D001334 2.2e-10 69.3 112 38.4
Nitab4.5_0008905g0060 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.7e-10 68.6 111 39.6
Peaxi162Scf00822g00048 Petunia axillaris HOM05D000111 ORTHO05D001334 6.3e-10 67.8 109 36.7
Nitab4.5_0001356g0180 Nicotiana tabacum HOM05D000111 ORTHO05D001334 8.2e-10 67.4 96 39.6
Nitab4.5_0003154g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.1e-09 67.0 111 38.7
TWI81G0511 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 1.8e-09 66.2 97 37.1
PGSC0003DMG400014762 Solanum tuberosum HOM05D000111 ORTHO05D001334 2.4e-09 65.9 112 36.6
PGSC0003DMG400029577 Solanum tuberosum HOM05D000111 ORTHO05D001334 2.4e-09 65.9 112 36.6
TWI81G0176 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 2.4e-09 65.9 113 38.9
TWI81G0621 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 2.4e-09 65.9 97 37.1
Nitab4.5_0002908g0050 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.1e-09 65.5 120 39.2
vmacro11022 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.5e-08 63.2 118 37.3
Nitab4.5_0000033g0280 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.6e-08 62.4 98 36.7
Rhsim02G0221400 Rhododendron simsii HOM05D000111 ORTHO05D001334 2.6e-08 62.4 117 35.9
Nitab4.5_0000528g0090 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.5e-08 61.6 53 56.6
Rhsim02G0167100 Rhododendron simsii HOM05D000111 ORTHO05D001334 7.7e-08 60.8 115 34.8
Solyc08g080700.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 7.7e-08 60.8 111 36.9
Nitab4.5_0009639g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-07 59.3 51 56.9
Peaxi162Scf00714g00123 Petunia axillaris HOM05D000111 ORTHO05D001334 2.2e-07 59.3 112 36.6
TWI81G0783 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 2.9e-07 58.9 113 35.4
Nitab4.5_0002908g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.8e-07 58.5 114 39.5
TWI81G0353 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 5.0e-07 58.2 106 40.6
TWI81G0955 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 5.0e-07 58.2 112 34.8
Hma1.2p1_0377F.1_g139400 Hydrangea macrophylla HOM05D000111 ORTHO05D001334 6.5e-07 57.8 93 36.6
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-07 57.8 51 56.9
Solyc08g080840.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 8.5e-07 57.4 64 50.0
Nitab4.5_0010247g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.4e-06 56.6 46 56.5
Peaxi162Scf00812g00056 Petunia axillaris HOM05D000111 ORTHO05D001334 1.4e-06 56.6 62 50.0
Rhsim02G0177500 Rhododendron simsii HOM05D000111 ORTHO05D001334 1.9e-06 56.2 115 33.9
Hma1.2p1_1529F.1_g289160 Hydrangea macrophylla HOM05D000111 ORTHO05D001334 2.5e-06 55.8 121 33.1
Lj1g0004745 Lotus japonicus HOM05D000111 ORTHO05D000134 2.5e-06 55.8 105 28.6
Lj1g0012600 Lotus japonicus HOM05D000111 ORTHO05D000134 2.5e-06 55.8 112 34.8
Nitab4.5_0005723g0010 Nicotiana tabacum HOM05D004661 ORTHO05D005827 2.5e-06 55.8 98 31.6
Nitab4.5_0009357g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.5e-06 55.8 51 51.0
Hma1.2p1_0208F.1_g088240 Hydrangea macrophylla HOM05D000111 ORTHO05D001334 3.2e-06 55.5 103 34.0
Nitab4.5_0000648g0050 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.2e-06 55.5 51 52.9
Nitab4.5_0000966g0100 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.2e-06 55.5 86 34.9
PSO384G0048 Papaver somniferum HOM05D000111 ORTHO05D000134 3.2e-06 55.5 123 33.3
TWI81G0559 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 3.2e-06 55.5 105 35.2
vmacro11298 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 3.2e-06 55.5 117 35.9
Lj5g0021044 Lotus japonicus HOM05D000111 ORTHO05D000134 9.4e-06 53.9 103 34.0


User provided reference genes

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