Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g055250.3 Solanum lycopersicum HOM05D008673 ORTHO05D010863 7.6e-80 300.4 151 100.0
Sopen07g026970 Solanum pennellii HOM05D008673 ORTHO05D010863 1.1e-78 296.6 151 98.7
PGSC0003DMG400020413 Solanum tuberosum HOM05D008673 ORTHO05D010863 6.4e-71 270.8 151 91.4
Peaxi162Scf00469g00533 Petunia axillaris HOM05D008673 ORTHO05D010863 1.3e-44 183.3 153 67.3
Nitab4.5_0000249g0110 Nicotiana tabacum HOM05D008673 ORTHO05D010863 2.6e-40 169.1 154 66.2
Nitab4.5_0007923g0050 Nicotiana tabacum HOM05D008673 ORTHO05D010863 2.3e-36 156.0 158 63.3
Hma1.2p1_0178F.1_g078530 Hydrangea macrophylla HOM05D008673 ORTHO05D010863 2.5e-30 136.0 143 53.8
Ciclev10017107m.g Citrus clementina HOM05D008673 ORTHO05D010863 7.2e-30 134.4 148 55.4
Dinv11960 Davidia involucrata HOM05D008673 ORTHO05D010863 2.7e-29 132.5 131 58.8
Gohir.A05G376500 Gossypium hirsutum HOM05D008673 ORTHO05D010863 4.4e-27 125.2 143 51.0
Gohir.1Z049426 Gossypium hirsutum HOM05D008673 ORTHO05D010863 7.4e-27 124.4 146 50.0
Gohir.1Z049527 Gossypium hirsutum HOM05D008673 ORTHO05D010863 7.4e-27 124.4 146 50.0
Cpa.g.c43414 Carica papaya HOM05D008673 ORTHO05D010863 1.3e-26 123.6 141 50.4
CSS0031774 Camellia sinensis var. sinensis HOM05D008673 ORTHO05D010863 1.7e-26 123.2 145 55.2
Atru.chr6.2763 Acer truncatum HOM05D008673 ORTHO05D010863 6.3e-26 121.3 135 51.9
MBI06_g36541_MAGBIO Magnolia biondii HOM05D008673 ORTHO05D010863 1.1e-25 120.6 145 53.8
Nn3g21118 Nelumbo nucifera HOM05D008673 ORTHO05D010863 1.4e-25 120.2 145 52.4
Rhsim06G0129800 Rhododendron simsii HOM05D008673 ORTHO05D010863 1.8e-25 119.8 145 52.4
Thecc.01G153500 Theobroma cacao HOM05D008673 ORTHO05D010863 1.8e-25 119.8 148 48.0
COL.COLO4_33611 Corchorus olitorius HOM05D008673 ORTHO05D010863 2.4e-25 119.4 149 47.7
MD17G1264400 Malus domestica HOM05D008673 ORTHO05D010863 3.1e-25 119.0 141 49.6
PSO170G4741 Papaver somniferum HOM05D008673 ORTHO05D010863 2.2e-23 112.8 148 46.6
QL08p042310 Quercus lobata HOM05D008673 ORTHO05D010863 2.9e-23 112.5 156 46.8
Migut.M00276 Erythranthe guttata HOM05D008673 ORTHO05D010863 1.1e-22 110.5 159 45.3
Cfa023576 Carpinus fangiana HOM05D008673 ORTHO05D010863 2.5e-22 109.4 137 48.9
Haze_13428 Corylus avellana HOM05D008673 ORTHO05D010863 2.5e-22 109.4 137 48.9
PSO782G1671 Papaver somniferum HOM05D008673 ORTHO05D010863 4.2e-22 108.6 149 45.6
Aqoxy4G00256 Aquilegia oxysepala HOM05D008673 ORTHO05D010863 6.1e-21 104.8 143 49.0
TAR626G0445 Trochodendron aralioides HOM05D008673 ORTHO05D010863 6.1e-21 104.8 168 41.7
Nn1g04505 Nelumbo nucifera HOM05D008673 ORTHO05D010863 7.9e-21 104.4 144 45.8
CANSAT64G3005 Cannabis sativa HOM05D008673 ORTHO05D010863 1.1e-19 100.5 146 42.5
TAR686G0002 Trochodendron aralioides HOM05D008673 ORTHO05D010863 3.3e-19 99.0 163 41.1
SEGI_15633 Sequoiadendron giganteum HOM05D008673 ORTHO05D010863 3.5e-16 89.0 165 40.6
GSVIVG01020747001 Vitis vinifera HOM05D008673 ORTHO05D010863 3.5e-16 89.0 113 46.0
Prupe.3G113700 Prunus persica HOM05D008673 ORTHO05D010863 5.2e-12 75.1 141 41.8
SMO361G0580 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 2.8e-10 69.3 141 36.9
SMO361G0282 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 3.7e-10 68.9 141 36.9
Pp3c14_19400 Physcomitrium patens HOM05D008673 ORTHO05D010863 4.1e-09 65.5 140 32.1
AagrBONN_evm.TU.Sc2ySwM_344.5531 Anthoceros agrestis HOM05D008673 ORTHO05D010863 4.5e-08 62.0 151 29.1
Pp3c1_33030 Physcomitrium patens HOM05D008673 ORTHO05D010863 8.5e-07 57.8 141 30.5
Pp3c22_5700 Physcomitrium patens HOM05D046728 ORTHO05D313617 1.9e-06 56.6 44 56.8
Mapoly0040s0119 Marchantia polymorpha HOM05D008673 ORTHO05D010863 4.2e-06 55.5 144 25.7
Pp3c2_4650 Physcomitrium patens HOM05D008673 ORTHO05D010863 9.4e-06 54.3 148 29.1


User provided reference genes

Program Settings