Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 3.2e-107 391.7 194 100.0
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 2.1e-103 379.0 194 96.9
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 9.0e-94 347.1 187 92.5
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 8.8e-81 303.9 217 72.8
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 9.7e-80 300.4 196 79.6
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 5.0e-60 235.0 197 65.0
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 1.1e-35 154.1 200 50.0
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 2.6e-32 142.9 197 49.2
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 8.6e-28 127.9 199 44.7
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 1.1e-25 120.9 193 44.6
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 2.3e-25 119.8 196 41.8
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 2.3e-25 119.8 201 45.3
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.5e-24 117.1 209 42.1
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 2.6e-24 116.3 218 41.3
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 3.4e-24 115.9 186 43.5
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 5.8e-24 115.2 197 43.1
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 7.6e-24 114.8 195 44.1
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 1.7e-23 113.6 217 37.8
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 1.1e-22 110.9 216 38.9
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 1.2e-21 107.5 196 41.3
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 2.7e-21 106.3 210 40.0
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 2.7e-21 106.3 197 43.1
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 2.7e-21 106.3 193 42.5
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 3.5e-21 105.9 196 43.4
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 6.0e-21 105.1 170 42.9
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 7.8e-21 104.8 198 42.9
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 1.0e-20 104.4 204 38.2
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 8.6e-20 101.3 193 38.3
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 1.1e-19 100.9 194 40.7
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 1.2e-18 97.4 199 41.2
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 2.1e-18 96.7 196 41.3
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 2.8e-18 96.3 202 38.1
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 1.1e-17 94.4 247 34.0
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 1.4e-17 94.0 189 37.6
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 2.4e-17 93.2 198 38.4
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.5e-16 90.5 201 36.8
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 2.6e-16 89.7 198 36.4
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 7.6e-16 88.2 198 38.9
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 7.6e-16 88.2 194 39.2
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.3e-15 87.4 200 38.0
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 4.9e-15 85.5 198 36.9
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.1e-14 84.3 197 37.6
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 2.4e-14 83.2 195 39.5
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 9.3e-14 81.3 200 34.5
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.6e-13 80.5 197 37.1
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 2.7e-13 79.7 197 36.5
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.3e-12 76.6 194 33.5
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 3.0e-12 76.3 196 33.2
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 3.0e-12 76.3 199 34.7
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 3.0e-12 76.3 196 34.7
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 3.9e-12 75.9 199 34.2
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 5.1e-12 75.5 199 36.2
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 5.1e-12 75.5 199 36.2
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 6.6e-12 75.1 199 34.2
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 8.7e-12 74.7 200 35.5
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.9e-11 73.6 199 34.7
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.9e-11 73.6 190 34.7
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 2.5e-11 73.2 199 33.7
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 2.5e-11 73.2 188 36.2
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 3.3e-11 72.8 188 35.1
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 8.1e-10 68.2 170 35.9
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 1.8e-09 67.0 199 35.2
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 3.1e-09 66.2 199 35.2
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 3.4e-08 62.8 204 33.8
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 3.2e-06 56.2 98 41.8


User provided reference genes

Program Settings