Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 8.6e-100 367.1 198 100.0
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.4e-81 305.8 170 98.8
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.1e-81 305.4 169 97.6
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.0e-69 264.6 173 84.4
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.9e-68 261.9 177 81.9
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 9.0e-65 250.8 174 79.9
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 4.9e-63 245.0 175 77.7
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 3.3e-59 232.3 173 72.8
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 3.1e-57 225.7 174 74.1
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.0e-56 223.0 170 69.4
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 2.0e-56 223.0 169 72.8
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 5.9e-56 221.5 172 70.3
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 7.6e-56 221.1 176 70.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 7.6e-56 221.1 176 70.5
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 7.6e-56 221.1 170 69.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.0e-55 220.7 165 73.9
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.7e-55 219.9 170 69.4
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.2e-55 219.5 174 68.4
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.9e-55 219.2 173 69.4
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.8e-55 218.8 172 70.9
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.9e-54 216.5 173 71.1
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.1e-53 213.0 166 72.9
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 7.9e-53 211.1 178 66.9
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 7.9e-53 211.1 186 66.7
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.0e-52 210.7 178 65.2
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.3e-52 210.3 173 69.4
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.3e-52 210.3 181 66.3
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.8e-52 209.9 176 66.5
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 3.0e-52 209.1 174 67.2
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.0e-52 209.1 178 64.6
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 3.9e-52 208.8 176 64.2
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 5.1e-52 208.4 170 67.6
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 8.7e-52 207.6 172 69.2
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 8.7e-52 207.6 177 67.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 8.7e-52 207.6 169 66.9
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 8.7e-52 207.6 206 61.7
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.9e-51 206.5 178 66.9
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.3e-51 205.7 205 59.5
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 4.3e-51 205.3 174 68.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.3e-51 205.3 174 68.4
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 7.4e-51 204.5 176 64.8
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 9.7e-51 204.1 172 65.7
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.3e-50 203.8 177 68.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.6e-50 203.4 172 70.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.2e-50 203.0 173 68.2
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 2.2e-50 203.0 176 68.2
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.2e-50 203.0 175 66.3
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.2e-50 203.0 178 66.3
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.8e-50 202.6 178 67.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 4.8e-50 201.8 177 66.7
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.8e-50 201.8 178 67.4
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 6.3e-50 201.4 177 66.7
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.3e-50 201.4 176 63.6
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 8.2e-50 201.1 182 65.9
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.1e-49 200.7 175 68.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-49 200.7 175 68.0
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.4e-49 200.3 175 65.1
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 2.4e-49 199.5 181 65.7
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.4e-49 199.5 174 68.4
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 2.4e-49 199.5 176 65.3
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.5e-48 196.8 176 64.2
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.0e-48 196.4 179 62.6
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.0e-48 196.4 180 61.7
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 3.4e-48 195.7 170 65.3
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.4e-48 195.7 177 64.4
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.5e-48 195.3 182 62.6
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.9e-47 192.6 180 65.6
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.8e-47 192.2 174 63.8
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 3.8e-47 192.2 175 65.1
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.0e-47 191.8 181 58.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.5e-47 191.4 175 65.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.4e-46 190.3 182 59.9
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.2e-46 189.1 177 63.3
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 4.2e-46 188.7 180 62.8
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.2e-46 188.7 174 64.9
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 5.5e-46 188.3 191 60.7
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.5e-46 188.3 174 64.9
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 7.2e-46 188.0 170 64.1
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.4e-46 187.6 129 77.5
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.6e-45 186.8 175 65.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.1e-45 186.4 184 61.4
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 2.1e-45 186.4 178 62.9
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.1e-45 186.4 129 76.0
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 3.6e-45 185.7 184 61.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.6e-45 185.7 175 64.6
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.6e-45 185.7 115 80.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 4.6e-45 185.3 175 64.0
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.6e-45 185.3 134 72.4
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.1e-45 184.9 189 58.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.0e-44 184.1 179 59.2
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.3e-44 183.0 180 58.9
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.3e-44 183.0 181 62.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 3.0e-44 182.6 177 62.7
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 3.0e-44 182.6 179 58.7
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-44 182.2 188 60.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.7e-44 181.4 177 61.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.7e-44 181.4 177 61.6
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 6.7e-44 181.4 188 59.6
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 8.8e-44 181.0 181 61.9
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 8.8e-44 181.0 176 60.8
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 8.8e-44 181.0 136 71.3
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.5e-43 180.3 171 63.7
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.5e-43 179.5 178 59.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.3e-43 179.1 173 63.6
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.3e-43 179.1 173 63.6
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.3e-42 177.2 170 61.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 2.2e-42 176.4 171 62.0
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.2e-42 176.4 135 70.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.3e-42 174.9 124 73.4
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 6.3e-42 174.9 135 69.6
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 9.1e-41 171.0 173 61.8
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.5e-40 170.2 165 61.8
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.5e-40 170.2 132 67.4
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 2.0e-40 169.9 103 81.6
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 8.8e-36 154.5 136 58.8
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.1e-33 145.6 138 64.5
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 7.7e-32 141.4 85 78.8
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.7e-31 140.2 143 55.9
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.7e-29 132.9 133 53.4
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 6.1e-29 131.7 184 45.7
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.8e-28 130.2 134 51.5
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 5.7e-27 125.2 126 52.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 9.7e-27 124.4 122 54.9
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.1e-25 119.4 130 56.2
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 3.2e-22 109.4 141 48.2
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.4e-20 104.0 105 47.6
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 5.2e-20 102.1 142 52.8
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 7.5e-19 98.2 170 44.7
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.8e-07 59.3 98 29.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.5e-06 57.4 100 29.0
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.3e-06 55.8 98 28.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.3e-06 55.8 98 28.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.3e-06 55.8 98 28.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.6e-06 55.5 98 28.6


User provided reference genes

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