Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 2.3e-200 702.2 400 100.0
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 1.4e-189 666.4 409 93.9
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.2e-178 628.6 417 85.6
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 1.3e-134 483.8 435 67.4
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.7e-134 483.4 379 74.7
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 6.2e-113 411.8 438 60.5
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.2e-109 399.4 438 59.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 9.0e-64 248.4 422 44.8
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.9e-53 214.2 432 40.7
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 2.3e-51 207.2 426 40.6
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.6e-50 203.8 421 41.6
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 4.8e-49 199.5 469 37.7
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 3.1e-48 196.8 441 38.3
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.5e-47 194.5 472 35.0
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.6e-47 193.7 487 35.5
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 1.3e-46 191.4 424 37.0
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 1.7e-46 191.0 327 43.7
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.9e-46 190.3 489 36.4
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.5e-45 187.2 432 35.6
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 5.5e-45 186.0 442 39.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 7.2e-45 185.7 427 37.0
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 9.4e-45 185.3 449 35.4
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.0e-43 181.8 430 36.0
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.4e-43 181.4 442 35.7
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.8e-43 181.0 449 36.1
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.3e-43 180.6 474 34.6
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 8.8e-43 178.7 430 35.6
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.1e-42 178.3 427 36.8
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 1.1e-42 178.3 423 37.8
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 1.5e-42 177.9 429 36.8
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.3e-42 176.8 467 33.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 4.4e-42 176.4 424 35.8
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 5.7e-42 176.0 443 35.0
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 7.4e-42 175.6 464 35.6
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 7.4e-42 175.6 421 35.4
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 9.7e-42 175.3 463 34.6
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.3e-41 174.9 424 36.1
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 2.8e-41 173.7 446 35.2
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 2.8e-41 173.7 432 37.3
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 3.7e-41 173.3 430 34.4
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 2.4e-40 170.6 447 33.6
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 7.0e-40 169.1 477 32.5
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 7.0e-40 169.1 425 36.9
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.0e-39 167.5 197 49.7
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 3.5e-39 166.8 399 37.6
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.0e-38 165.2 434 34.6
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.0e-38 165.2 442 33.7
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.7e-38 164.5 450 33.3
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.9e-38 163.7 435 35.4
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.8e-38 163.3 444 32.4
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 5.0e-38 162.9 442 34.6
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 6.5e-38 162.5 460 34.6
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 1.1e-37 161.8 418 35.4
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.9e-37 161.0 423 35.7
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 5.5e-37 159.5 423 36.2
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 5.5e-37 159.5 430 33.0
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 9.4e-37 158.7 423 36.4
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 9.4e-37 158.7 423 36.2
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 1.2e-36 158.3 418 32.8
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.6e-36 157.9 405 36.5
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 3.6e-36 156.8 447 32.4
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.4e-35 154.8 447 34.0
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 3.0e-35 153.7 456 32.2
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 6.7e-35 152.5 461 33.2
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 2.0e-34 151.0 416 33.7
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 3.3e-34 150.2 422 34.8
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.7e-33 147.9 434 33.4
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 3.7e-33 146.7 411 33.3
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.7e-33 146.7 424 33.7
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 4.8e-33 146.4 411 33.1
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 4.8e-33 146.4 493 31.0
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 4.8e-33 146.4 456 30.9
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.4e-32 144.8 411 33.1
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.4e-32 144.8 463 32.4
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 3.1e-32 143.7 436 33.9
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 7.0e-32 142.5 435 31.3
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 4.5e-31 139.8 420 30.2
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 4.5e-31 139.8 298 39.9
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.7e-30 137.9 425 30.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 6.5e-30 136.0 459 31.8
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.1e-29 135.2 414 32.4
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.1e-29 135.2 414 32.4
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.1e-29 135.2 418 33.0
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 2.5e-29 134.0 412 31.3
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 2.5e-29 134.0 417 31.2
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 8.0e-28 129.0 433 32.1
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 8.0e-28 129.0 433 32.1
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.4e-27 128.3 414 31.2
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 6.8e-27 125.9 435 30.8
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 4.8e-25 119.8 463 29.4
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.2e-23 115.2 497 29.0
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 4.5e-23 113.2 477 29.4
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 3.8e-22 110.2 409 29.3
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 3.8e-22 110.2 162 46.3
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 5.0e-22 109.8 413 29.3
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 5.5e-21 106.3 279 35.8
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 9.5e-21 105.5 441 30.2
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.6e-20 104.8 194 38.1
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.0e-15 87.8 122 50.8
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.0e-15 87.8 132 48.5
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 2.7e-15 87.4 180 37.8
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 3.8e-14 83.6 143 39.2
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 4.7e-12 76.6 536 25.7
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 5.7e-10 69.7 389 26.5
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.3e-09 65.9 181 33.1
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 9.2e-08 62.4 303 24.8
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 9.2e-08 62.4 104 42.3
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 1.0e-06 58.9 430 25.3
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.7e-06 58.2 181 31.5
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 1.7e-06 58.2 171 35.1


User provided reference genes

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