Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.9e-136 489.2 255 100.0
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 1.1e-128 463.4 255 96.5
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.6e-127 459.5 255 93.7
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 5.0e-108 394.8 258 80.2
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.1e-107 393.7 254 83.5
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 3.9e-105 385.2 259 81.5
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 1.2e-90 337.0 249 71.1
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 8.0e-90 334.3 255 69.8
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.0e-89 334.0 255 71.0
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.4e-89 333.6 259 69.5
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 3.0e-89 332.4 255 68.2
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 8.8e-89 330.9 255 67.8
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 1.5e-88 330.1 255 69.0
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 1.5e-88 330.1 255 68.6
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 3.4e-88 328.9 256 68.4
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 9.7e-88 327.4 256 66.4
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.7e-87 326.6 259 68.3
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 2.2e-87 326.2 266 66.2
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.8e-87 325.9 255 67.1
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 6.3e-87 324.7 259 64.9
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 1.4e-86 323.6 257 66.9
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 3.1e-86 322.4 258 66.3
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 3.1e-86 322.4 255 65.9
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 2.7e-85 319.3 255 65.1
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 2.7e-85 319.3 258 65.9
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 7.7e-85 317.8 257 68.9
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 7.7e-85 317.8 257 65.0
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.7e-84 316.6 260 65.4
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 1.7e-84 316.6 258 67.1
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 6.5e-84 314.7 261 64.4
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 8.5e-84 314.3 257 66.1
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.5e-84 314.3 258 66.7
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 8.5e-84 314.3 259 64.5
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 8.5e-84 314.3 255 63.5
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 1.1e-83 313.9 256 64.1
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 1.5e-83 313.5 283 61.8
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 2.5e-83 312.8 257 63.0
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 2.5e-83 312.8 259 62.5
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 3.2e-83 312.4 257 63.8
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 7.2e-83 311.2 278 61.2
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 1.6e-82 310.1 254 63.0
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 4.7e-82 308.5 267 62.9
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 8.0e-82 307.8 255 62.7
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.0e-81 307.4 254 62.2
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 1.0e-81 307.4 266 62.0
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 1.8e-81 306.6 257 62.3
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 4.4e-80 302.0 259 63.3
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 7.5e-80 301.2 253 63.6
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 7.5e-80 301.2 256 61.7
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 7.5e-80 301.2 257 60.7
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.7e-79 300.1 255 60.8
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 2.2e-79 299.7 256 61.7
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 2.2e-79 299.7 257 63.4
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 3.7e-79 298.9 255 62.4
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 6.3e-79 298.1 256 61.3
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 6.3e-79 298.1 258 64.3
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 8.3e-79 297.7 259 63.7
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.1e-78 297.4 257 61.5
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 1.4e-78 297.0 256 62.1
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.4e-78 296.2 215 71.6
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 3.1e-78 295.8 254 61.8
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 4.1e-78 295.4 258 62.4
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 7.0e-78 294.7 259 62.5
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 9.1e-78 294.3 262 62.6
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.6e-77 293.5 255 62.0
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 2.0e-77 293.1 256 59.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 7.7e-77 291.2 254 59.4
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 2.3e-76 289.7 256 60.9
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 2.5e-75 286.2 262 58.0
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 2.5e-75 286.2 246 60.6
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 5.5e-75 285.0 254 59.4
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 5.5e-75 285.0 254 59.1
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 2.1e-74 283.1 269 58.0
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 2.1e-74 283.1 254 59.1
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 2.1e-74 283.1 252 58.3
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 2.3e-73 279.6 254 58.3
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 6.8e-73 278.1 252 57.9
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 1.5e-72 276.9 269 56.9
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 3.4e-72 275.8 258 57.0
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 2.8e-71 272.7 279 54.5
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 2.4e-70 269.6 256 58.6
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 3.2e-70 269.2 279 53.8
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 5.9e-69 265.0 266 53.8
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 6.6e-68 261.5 255 55.3
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 1.9e-67 260.0 260 55.0
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 4.3e-67 258.8 259 57.9
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.5e-64 250.4 260 57.3
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 3.4e-64 249.2 208 62.0
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 5.8e-64 248.4 259 54.1
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 1.3e-63 247.3 253 53.4
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.7e-63 246.9 194 69.6
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.1e-62 244.2 254 53.9
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 2.3e-60 236.5 304 46.4
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 4.3e-59 232.3 258 55.0
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.6e-52 208.4 257 50.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 1.2e-50 204.1 159 67.9
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 2.1e-50 203.4 247 47.4
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 8.1e-50 201.4 158 63.9
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 5.1e-44 182.2 244 44.7
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 5.8e-40 168.7 171 52.6
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 5.8e-32 142.1 249 39.4
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 2.7e-29 133.3 232 38.4
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.3e-28 131.0 148 52.7
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 1.4e-22 110.9 127 48.8
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.5e-16 90.9 92 51.1
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 8.4e-15 85.1 64 64.1
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.7e-13 80.1 221 29.9
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 7.9e-13 78.6 221 29.9
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 1.3e-07 61.2 126 34.9
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 1.3e-07 61.2 44 63.6
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 3.8e-07 59.7 110 39.1


User provided reference genes

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