Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.2e-55 219.5 107 100.0
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 1.8e-51 205.7 107 94.4
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 8.9e-51 203.4 107 93.5
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 3.0e-46 188.3 107 86.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 4.4e-34 147.9 104 69.2
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.3e-33 146.4 108 68.5
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.3e-33 146.4 108 67.6
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 4.9e-33 144.4 115 67.0
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.4e-32 142.9 109 67.0
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 3.2e-32 141.7 79 86.1
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 7.1e-32 140.6 114 64.9
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 7.1e-32 140.6 113 65.5
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 9.3e-32 140.2 113 64.6
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 9.3e-32 140.2 113 64.6
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.1e-31 139.0 115 63.5
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.5e-31 138.3 109 67.0
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 5.1e-30 134.4 115 62.6
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 5.1e-30 134.4 114 63.2
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 8.7e-30 133.7 113 59.3
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 1.1e-29 133.3 108 60.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.1e-29 133.3 110 60.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.5e-29 132.9 72 87.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.9e-29 132.5 111 62.2
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.9e-29 132.5 102 64.7
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.9e-29 132.5 108 62.0
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 2.5e-29 132.1 107 63.6
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 3.3e-29 131.7 106 62.3
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 3.3e-29 131.7 109 61.5
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 5.6e-29 131.0 108 62.0
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 7.3e-29 130.6 111 59.5
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 9.6e-29 130.2 108 59.3
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 9.6e-29 130.2 109 59.6
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-28 129.8 113 54.9
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.3e-28 129.8 111 59.5
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.3e-28 129.8 111 59.5
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 1.3e-28 129.8 106 62.3
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.3e-28 129.8 101 60.4
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.6e-28 129.4 109 60.6
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.1e-28 129.0 109 60.6
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 4.8e-28 127.9 109 61.5
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 6.2e-28 127.5 107 59.8
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.4e-27 126.3 109 57.8
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.4e-27 126.3 108 55.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.8e-27 125.9 108 59.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 2.4e-27 125.6 109 60.6
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-27 124.4 109 57.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 5.3e-27 124.4 109 57.8
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 9.0e-27 123.6 105 57.1
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.2e-26 123.2 108 60.2
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.5e-26 122.9 110 57.3
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 2.0e-26 122.5 108 61.1
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.5e-26 121.3 109 56.0
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 7.6e-26 120.6 109 56.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 9.9e-26 120.2 107 55.1
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.7e-25 119.4 104 57.7
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.7e-25 119.4 109 56.9
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.2e-25 119.0 107 56.1
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.2e-25 119.0 109 53.2
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 2.2e-25 119.0 109 56.0
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.2e-25 119.0 109 56.9
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.9e-25 118.6 108 55.6
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.9e-25 118.6 107 55.1
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 3.8e-25 118.2 109 54.1
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.8e-25 118.2 98 64.3
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.9e-25 117.9 110 55.5
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 4.9e-25 117.9 110 55.5
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 6.4e-25 117.5 113 55.8
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.1e-24 116.7 100 57.0
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.1e-24 116.7 107 57.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.1e-24 116.7 110 54.5
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.4e-24 116.3 107 57.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.4e-24 116.3 106 55.7
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.9e-24 115.9 113 54.0
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 2.4e-24 115.5 109 51.4
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 3.2e-24 115.2 100 54.0
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.2e-24 115.2 107 57.9
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 7.1e-24 114.0 104 53.8
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 9.3e-24 113.6 100 53.0
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 9.3e-24 113.6 100 53.0
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.2e-23 113.2 100 56.0
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.2e-23 113.2 100 56.0
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.7e-23 112.1 100 52.0
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.7e-23 112.1 100 52.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.5e-23 111.7 99 59.6
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 4.6e-23 111.3 101 55.4
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 4.6e-23 111.3 106 51.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.0e-23 110.9 109 50.5
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 7.9e-23 110.5 100 55.0
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 2.3e-22 109.0 75 66.7
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 3.0e-22 108.6 100 57.0
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.5e-21 106.3 100 53.0
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 3.3e-21 105.1 99 56.6
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 2.1e-20 102.4 67 74.6
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 6.2e-20 100.9 103 47.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.8e-19 99.4 117 47.0
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 1.5e-18 96.3 100 48.0
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.9e-17 92.0 57 73.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 4.9e-17 91.3 99 44.4
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.4e-16 89.7 103 42.7
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.4e-16 89.7 98 52.0
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.4e-16 89.0 108 43.5
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 4.2e-16 88.2 65 64.6
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 6.0e-15 84.3 99 43.4
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 9.3e-08 60.5 53 60.4
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 6.0e-07 57.8 36 77.8
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 3.0e-06 55.5 55 45.5


User provided reference genes

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