Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 3.0e-95 352.1 210 100.0
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 2.3e-74 282.7 210 80.5
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 2.9e-37 159.5 210 56.2
Peaxi162Scf00802g10028 Petunia axillaris HOM05D016037 ORTHO05D003654 4.3e-33 145.6 221 56.6
Sopen07g024060 Solanum pennellii HOM05D016037 ORTHO05D003654 7.1e-28 128.3 84 94.0
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 6.3e-16 88.6 212 37.3
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 1.3e-13 80.9 208 33.2
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 1.2e-11 74.3 107 43.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.2e-11 74.3 194 34.0
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 2.3e-10 70.1 193 33.7
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.9e-10 69.3 210 34.8
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 3.9e-10 69.3 205 33.2
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 5.1e-10 68.9 102 43.1
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 8.8e-10 68.2 128 36.7
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.1e-09 67.8 114 40.4
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 1.5e-09 67.4 202 30.2
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 2.0e-09 67.0 196 27.6
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 2.6e-09 66.6 212 30.7
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.6e-09 66.6 113 40.7
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.4e-09 65.9 205 29.8
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 7.4e-09 65.1 204 32.8
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 7.4e-09 65.1 196 29.6
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 9.7e-09 64.7 201 26.9
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.3e-08 64.3 217 30.9
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 1.7e-08 63.9 214 31.8
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.7e-08 63.9 158 31.6
Gohir.D05G382950 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.7e-08 63.9 105 39.0
Gorai.009G449500 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.7e-08 63.9 200 29.0
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 2.2e-08 63.5 115 40.9
Rhsim06G0176100 Rhododendron simsii HOM05D008806 ORTHO05D003654 2.8e-08 63.2 109 39.4
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 3.7e-08 62.8 213 34.3
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.7e-08 62.8 215 26.5
MSTRG.6638 Avicennia marina HOM05D016037 ORTHO05D003654 4.8e-08 62.4 218 31.2
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 6.3e-08 62.0 211 31.8
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 8.2e-08 61.6 214 29.4
Migut.M00045 Erythranthe guttata HOM05D005871 ORTHO05D003654 1.1e-07 61.2 211 35.1
Oeu029962.1 Olea europaea HOM05D016037 ORTHO05D003654 1.1e-07 61.2 190 31.1
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 1.4e-07 60.8 107 42.1
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 1.4e-07 60.8 193 32.1
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 1.8e-07 60.5 222 30.2
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.8e-07 60.5 157 29.3
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 2.4e-07 60.1 223 27.4
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 3.1e-07 59.7 167 28.7
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 4.1e-07 59.3 203 31.0
Cfa017914 Carpinus fangiana HOM05D000074 ORTHO05D000220 5.3e-07 58.9 90 42.2
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 5.3e-07 58.9 191 29.3
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 5.3e-07 58.9 96 43.8
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 5.3e-07 58.9 124 38.7
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 1.2e-06 57.8 197 24.4
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 1.5e-06 57.4 206 31.6
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 2.6e-06 56.6 205 28.3
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.5e-06 56.2 192 32.8
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 4.5e-06 55.8 82 42.7
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 4.5e-06 55.8 75 45.3


User provided reference genes

Program Settings