Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.1e-252 875.2 421 100.0
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 8.1e-249 863.2 421 98.1
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.9e-245 852.0 421 96.7
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 6.7e-227 790.4 421 88.6
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 1.0e-219 766.5 430 83.7
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 9.7e-218 760.0 430 84.7
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 2.4e-216 755.4 422 85.8
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 2.9e-190 668.7 427 72.4
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.3e-189 664.8 426 72.5
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.3e-189 664.8 426 72.5
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 9.8e-186 653.7 422 71.8
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.4e-185 651.0 427 70.5
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.3e-185 650.6 421 72.0
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 7.0e-184 647.5 424 71.0
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.7e-183 645.6 421 71.5
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.9e-183 644.4 422 70.6
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.3e-182 643.3 421 71.5
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.7e-182 642.9 421 71.0
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.3e-182 642.5 421 70.3
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.9e-182 641.7 422 69.2
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.6e-182 640.6 421 70.1
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 3.3e-181 638.6 424 70.3
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.6e-180 636.3 425 67.1
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 2.1e-180 636.0 422 70.4
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 4.7e-180 634.8 425 68.7
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 8.0e-180 634.0 424 68.9
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 8.0e-180 634.0 421 69.8
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.1e-179 633.6 417 71.5
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.8e-179 632.9 421 70.1
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 2.3e-179 632.5 422 69.9
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.1e-179 632.1 427 68.1
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.0e-179 631.7 424 68.6
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 4.0e-179 631.7 421 70.5
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 6.8e-179 630.9 424 68.6
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 8.9e-179 630.6 426 68.5
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 8.9e-179 630.6 426 68.5
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.9e-179 630.6 426 68.1
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.2e-178 630.2 424 68.4
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.2e-178 630.2 424 68.6
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.5e-178 629.8 419 69.7
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.0e-178 629.4 426 70.4
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 2.0e-178 629.4 430 67.9
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 3.4e-178 628.6 425 68.2
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 4.4e-178 628.2 427 68.1
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.5e-178 627.5 424 68.2
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.5e-178 627.5 424 68.2
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 7.5e-178 627.5 426 67.4
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.9e-177 625.5 425 68.2
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 4.9e-177 624.8 424 67.7
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 4.9e-177 624.8 427 68.6
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 8.3e-177 624.0 425 68.7
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.9e-176 622.9 434 68.0
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 1.9e-176 622.9 423 68.6
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 2.4e-176 622.5 427 67.9
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 3.2e-176 622.1 422 68.0
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 4.1e-176 621.7 417 69.5
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 5.4e-176 621.3 429 68.8
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 9.2e-176 620.5 424 67.5
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.0e-175 619.4 426 68.3
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.6e-175 618.2 415 69.9
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.0e-175 617.8 430 66.7
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.7e-174 616.3 431 67.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 3.9e-174 615.1 423 67.6
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 8.6e-174 614.0 423 68.1
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.1e-173 613.6 418 68.4
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.5e-173 613.2 426 65.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.9e-173 612.8 427 65.1
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.3e-173 612.1 429 68.3
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.6e-172 608.6 352 77.0
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 6.2e-172 607.8 426 66.7
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 2.3e-171 605.9 421 66.0
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 6.8e-171 604.4 426 64.6
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 8.9e-171 604.0 419 66.1
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 8.9e-171 604.0 345 78.0
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.6e-170 602.4 352 76.1
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.6e-170 602.4 423 67.1
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.4e-168 596.7 426 65.7
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 1.9e-168 596.3 383 70.8
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 5.4e-168 594.7 430 67.7
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 9.2e-168 594.0 427 66.5
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.2e-167 593.6 421 67.0
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 2.3e-166 589.3 416 65.4
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 3.0e-166 589.0 415 66.5
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 5.1e-166 588.2 424 62.7
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 6.6e-166 587.8 416 66.8
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 6.6e-166 587.8 427 65.3
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 6.6e-166 587.8 334 77.8
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 8.6e-166 587.4 417 67.1
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.5e-165 585.9 425 65.2
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 3.3e-165 585.5 419 67.1
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 4.3e-165 585.1 419 67.1
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 7.3e-165 584.3 416 66.8
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.2e-164 583.6 415 66.7
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 4.7e-164 581.6 334 78.7
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 8.1e-164 580.9 415 66.0
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 8.1e-164 580.9 415 66.0
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.8e-163 579.7 416 66.6
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.5e-162 576.6 429 65.0
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.4e-162 575.5 416 65.4
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 7.6e-162 574.3 349 73.6
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 7.6e-162 574.3 420 63.6
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.9e-161 572.4 430 63.3
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 2.9e-161 572.4 358 71.2
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 6.4e-161 571.2 375 68.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 9.2e-160 567.4 394 68.5
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 7.8e-159 564.3 412 64.3
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 3.9e-158 562.0 426 62.4
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.1e-157 560.5 357 70.6
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 3.6e-156 555.4 379 66.8
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.2e-153 546.2 422 62.3
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 6.6e-150 534.6 425 61.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 8.7e-150 534.3 396 62.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 2.3e-142 509.6 281 78.3
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.4e-139 500.4 368 61.7
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.8e-139 500.0 353 64.3
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 4.5e-138 495.4 281 77.9
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.5e-135 485.7 357 61.6
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 2.6e-130 469.5 353 61.2
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.2e-120 436.0 322 65.2
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 5.2e-102 375.6 402 48.0
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.3e-100 368.6 213 77.0
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 9.1e-99 364.8 209 76.6
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 8.5e-97 358.2 209 75.1
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 6.7e-94 348.6 336 51.2
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.4e-61 239.6 258 51.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 8.1e-55 218.8 400 38.5
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 6.9e-30 136.0 93 59.1
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 3.9e-25 120.2 86 67.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 5.1e-25 119.8 80 67.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.4e-19 101.7 113 48.7
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 6.9e-06 56.2 51 51.0


User provided reference genes

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