Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.3e-207 726.1 360 100.0
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.2e-153 545.0 360 78.3
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.0e-147 526.2 265 97.4
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 5.5e-145 518.1 265 95.1
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.6e-139 499.2 357 73.9
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 4.2e-129 465.3 353 70.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.8e-124 449.9 354 66.9
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.3e-122 443.7 342 65.5
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 9.4e-121 437.6 339 66.4
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 2.7e-120 436.0 349 63.6
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.3e-119 433.0 352 63.6
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 3.4e-118 429.1 352 62.5
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.2e-117 426.4 347 62.8
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 5.4e-116 421.8 355 63.9
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 1.7e-114 416.8 343 61.8
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 6.6e-114 414.8 346 61.0
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 4.2e-113 412.1 350 61.1
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.2e-112 410.6 331 62.8
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 8.0e-112 407.9 350 59.7
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.9e-111 404.4 357 58.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.5e-110 403.7 348 59.8
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.6e-110 402.9 354 60.2
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 4.4e-110 402.1 355 59.4
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 7.5e-110 401.4 357 57.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 2.9e-109 399.4 348 61.2
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 8.3e-109 397.9 336 62.5
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.8e-108 396.7 346 60.7
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.8e-108 396.7 344 59.3
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 4.1e-108 395.6 332 60.5
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 7.0e-108 394.8 353 58.9
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.6e-107 393.7 338 60.9
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.6e-107 393.7 345 58.8
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 2.7e-107 392.9 287 66.6
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 2.7e-107 392.9 250 74.0
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 3.5e-107 392.5 336 60.4
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 4.6e-107 392.1 336 59.8
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 7.8e-107 391.3 374 56.4
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 7.8e-107 391.3 344 58.4
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.3e-106 390.6 363 57.6
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 2.3e-106 389.8 336 61.3
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 6.6e-106 388.3 250 73.6
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 5.6e-105 385.2 349 59.0
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 5.6e-105 385.2 349 58.2
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 1.8e-103 380.2 236 76.7
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.3e-103 379.8 287 65.5
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 3.1e-103 379.4 231 77.1
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 8.9e-103 377.9 343 57.4
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.3e-101 374.0 342 57.3
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.3e-101 374.0 339 59.9
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.7e-101 373.6 404 53.2
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 1.7e-101 373.6 334 56.6
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.9e-101 372.9 266 66.5
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 4.9e-101 372.1 349 56.7
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 5.4e-100 368.6 279 64.5
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 1.2e-99 367.5 279 63.1
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 3.5e-99 365.9 349 53.9
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 4.6e-99 365.5 340 58.5
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.0e-98 364.4 344 56.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.3e-97 359.4 345 55.1
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 3.3e-97 359.4 333 56.2
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.3e-97 359.0 229 72.9
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 5.6e-97 358.6 238 68.5
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 1.2e-96 357.5 330 57.6
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.2e-96 357.5 341 53.4
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.2e-96 357.5 339 54.6
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 2.1e-96 356.7 344 55.5
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.8e-96 356.3 338 55.9
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 3.6e-96 355.9 331 57.4
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 4.7e-96 355.5 334 56.6
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 8.1e-96 354.8 344 54.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 8.1e-96 354.8 344 54.9
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.1e-95 354.4 237 67.5
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.5e-94 350.5 346 54.9
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 3.4e-94 349.4 342 53.8
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 5.8e-94 348.6 326 58.3
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 2.9e-93 346.3 345 54.2
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.9e-93 345.5 299 59.5
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.2e-91 340.9 221 70.1
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.6e-91 340.5 448 46.4
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.1e-91 340.1 209 77.0
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.6e-90 335.1 365 51.8
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.6e-90 335.1 365 51.8
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 1.9e-89 333.6 349 53.6
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 8.1e-88 328.2 214 73.8
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.7e-85 320.5 289 56.4
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.1e-83 313.5 236 66.5
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.1e-83 313.5 199 73.4
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 9.6e-81 304.7 320 52.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 4.6e-75 285.8 174 71.8
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.0e-74 283.1 348 47.4
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 5.6e-73 278.9 272 57.7
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 2.1e-72 276.9 222 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.4e-71 274.2 223 56.5
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 1.2e-67 261.2 240 51.7
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 6.6e-66 255.4 283 49.8
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 7.3e-65 251.9 228 55.3
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 7.3e-65 251.9 228 55.3
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 7.3e-65 251.9 222 52.3
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 9.6e-65 251.5 188 63.8
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.6e-64 249.6 244 55.7
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 5.3e-63 245.7 241 56.0
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 2.6e-62 243.4 301 48.8
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 8.7e-58 228.4 260 52.3
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 1.9e-49 200.7 233 43.8
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 5.1e-42 176.0 218 41.3
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.2e-37 160.6 108 67.6
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.2e-36 156.4 108 66.7
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 7.4e-33 145.6 103 66.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 6.3e-32 142.5 90 71.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.5e-30 136.3 97 60.8
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 8.5e-21 105.5 167 40.7
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 6.3e-16 89.4 142 45.1
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 1.1e-12 78.6 50 72.0
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 2.5e-12 77.4 226 30.5
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 4.7e-11 73.2 47 70.2
Solyc07g045280.3 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.0e-10 72.0 32 93.8
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 4.4e-09 66.6 151 32.5
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 8.3e-08 62.4 151 31.1
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 4.1e-07 60.1 152 28.9


User provided reference genes

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