Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 8.4e-54 213.4 104 100.0
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.2e-28 129.8 66 97.0
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.2e-28 129.8 66 97.0
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 6.7e-27 124.0 66 90.9
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.1e-25 119.0 66 87.9
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 2.8e-25 118.6 103 60.2
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 4.8e-25 117.9 66 81.8
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 4.8e-25 117.9 66 86.4
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 6.2e-25 117.5 66 83.3
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 8.2e-25 117.1 68 83.8
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 8.2e-25 117.1 66 81.8
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 1.1e-24 116.7 66 83.3
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.8e-24 115.9 66 81.8
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.8e-24 115.9 66 81.8
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 2.4e-24 115.5 66 81.8
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 3.1e-24 115.2 65 83.1
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.1e-24 115.2 66 81.8
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 3.1e-24 115.2 66 81.8
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 3.1e-24 115.2 66 80.3
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 4.1e-24 114.8 65 84.6
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 4.1e-24 114.8 66 83.3
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 4.1e-24 114.8 66 83.3
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 5.3e-24 114.4 64 82.8
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 5.3e-24 114.4 64 82.8
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 5.3e-24 114.4 68 77.9
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.9e-24 114.0 66 80.3
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 9.0e-24 113.6 66 78.8
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.2e-23 113.2 63 84.1
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 1.2e-23 113.2 65 81.5
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 2.0e-23 112.5 66 77.3
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 3.4e-23 111.7 66 80.3
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 3.4e-23 111.7 66 80.3
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 4.5e-23 111.3 68 76.5
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 4.5e-23 111.3 68 76.5
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 5.8e-23 110.9 66 81.8
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 5.8e-23 110.9 66 75.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 7.6e-23 110.5 64 78.1
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 78.8
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 1.0e-22 110.2 66 77.3
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.3e-22 109.8 66 75.8
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.7e-22 109.4 66 77.3
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.2e-22 109.0 63 82.5
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 2.2e-22 109.0 66 78.8
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 2.2e-22 109.0 64 79.7
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.9e-22 108.6 66 77.3
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.9e-22 108.6 66 77.3
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 2.9e-22 108.6 65 80.0
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.9e-22 108.6 66 77.3
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 3.8e-22 108.2 66 78.8
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 3.8e-22 108.2 66 75.8
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 5.0e-22 107.8 66 71.2
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 5.0e-22 107.8 66 71.2
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 6.5e-22 107.5 66 75.8
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 6.5e-22 107.5 66 71.2
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 6.5e-22 107.5 66 74.2
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 6.5e-22 107.5 66 72.7
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 6.5e-22 107.5 63 81.0
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 8.4e-22 107.1 63 81.0
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 8.4e-22 107.1 65 78.5
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 8.4e-22 107.1 66 74.2
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 8.4e-22 107.1 66 71.2
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 1.1e-21 106.7 64 76.6
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 1.1e-21 106.7 66 75.8
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.1e-21 106.7 65 80.0
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 1.1e-21 106.7 65 78.5
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.4e-21 106.3 66 69.7
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.4e-21 106.3 66 75.8
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.4e-21 106.3 64 75.0
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.9e-21 105.9 63 77.8
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 1.9e-21 105.9 66 74.2
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 3.2e-21 105.1 66 69.7
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 3.2e-21 105.1 65 73.8
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 3.2e-21 105.1 66 69.7
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 5.5e-21 104.4 66 72.7
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 7.2e-21 104.0 64 73.4
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 7.2e-21 104.0 66 75.8
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 7.2e-21 104.0 66 68.2
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 7.2e-21 104.0 66 74.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 9.3e-21 103.6 63 76.2
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 9.3e-21 103.6 66 72.7
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 9.3e-21 103.6 66 72.7
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 9.3e-21 103.6 66 68.2
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 1.2e-20 103.2 65 75.4
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 2.1e-20 102.4 66 69.7
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 2.7e-20 102.1 66 69.7
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 2.7e-20 102.1 66 65.2
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.7e-20 102.1 63 74.6
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 3.5e-20 101.7 66 71.2
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 7.9e-20 100.5 62 72.6
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.3e-19 99.0 56 80.4
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 3.0e-19 98.6 65 72.3
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 3.9e-19 98.2 66 63.6
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 5.1e-19 97.8 63 74.6
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 5.1e-19 97.8 63 74.6
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 5.1e-19 97.8 66 66.7
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 5.1e-19 97.8 66 66.7
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 6.7e-19 97.4 66 66.7
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.9e-18 95.9 63 73.0
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 4.3e-18 94.7 66 63.6
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 7.4e-18 94.0 66 65.2
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 3.7e-17 91.7 63 69.8
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.8e-17 91.3 54 79.6
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 6.3e-17 90.9 66 65.2
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 1.4e-16 89.7 66 63.6
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 4.1e-16 88.2 63 68.3
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 1.2e-15 86.7 58 70.7
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 2.0e-15 85.9 54 74.1
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 6.1e-12 74.3 63 61.9
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 2.0e-10 69.3 66 47.0
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 2.2e-09 65.9 67 44.8
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.8e-09 64.7 39 71.8
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.4e-07 58.5 39 71.8


User provided reference genes

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