Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g042335.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.0e-105 386.7 188 100.0
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 3.8e-89 331.6 174 93.7
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 5.0e-89 331.3 174 93.1
Sopen08g006090 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-87 325.5 174 92.0
Solyc07g019577.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.7e-87 324.7 174 90.8
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-86 322.0 174 91.4
Solyc12g042603.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.2e-64 247.7 147 85.0
PGSC0003DMG400019874 Solanum tuberosum HOM05D000176 ORTHO05D014553 2.3e-62 242.7 165 72.1
Sopen07g014370 Solanum pennellii HOM05D000176 ORTHO05D000106 2.2e-60 236.1 123 93.5
Solyc01g033995.1 Solanum lycopersicum HOM05D000638 ORTHO05D000801 2.4e-59 232.6 124 92.7
Solyc08g014245.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-53 211.1 120 85.8
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 7.8e-50 201.1 170 60.0
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.6e-45 186.0 175 57.1
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 3.7e-44 182.2 183 56.8
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.6e-42 176.8 172 54.7
Sopen01g015170 Solanum pennellii HOM05D000176 ORTHO05D000106 4.6e-42 175.3 183 55.2
Solyc08g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.8e-42 174.5 183 55.7
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-41 173.7 183 54.6
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 1.3e-41 173.7 183 54.6
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-41 173.3 183 54.6
Solyc02g030462.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-41 172.6 183 54.1
Solyc11g150105.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-41 172.6 92 89.1
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-41 172.2 183 54.6
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.1e-38 162.5 171 52.6
Solyc10g018420.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.6e-37 159.5 87 88.5
Solyc07g019498.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 4.4e-37 158.7 176 52.8
Solyc06g050375.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 7.5e-37 157.9 82 93.9
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 5.6e-32 141.7 143 54.5
Sopen09g016220 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-30 134.4 148 51.4
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 1.3e-28 130.6 82 79.3
PGSC0003DMG400000655 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.2e-28 129.8 70 85.7
Sopen05g012360 Solanum pennellii HOM05D000176 ORTHO05D000106 2.9e-28 129.4 118 57.6
Solyc05g150125.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.1e-27 127.5 111 57.7
Solyc09g150111.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.2e-27 125.9 183 47.5
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 2.1e-26 123.2 113 54.9
Sopen04g021620 Solanum pennellii HOM05D000176 ORTHO05D000106 1.0e-25 120.9 149 47.0
Solyc04g050685.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.3e-25 119.8 98 62.2
CAN.G802.4 Capsicum annuum HOM05D000176 ORTHO05D000106 8.6e-25 117.9 135 50.4
Sopen06g015770 Solanum pennellii HOM05D000176 ORTHO05D000106 1.6e-23 113.6 87 60.9
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.6e-23 113.6 82 67.1
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.1e-23 113.2 85 63.5
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-23 113.2 78 69.2
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-23 113.2 78 69.2
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-23 113.2 78 69.2
Solyc03g059425.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.4e-21 105.5 103 55.3
Solyc07g150135.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.6e-21 104.8 111 54.1
Solyc08g016803.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.4e-19 100.5 58 87.9
Sopen06g015550 Solanum pennellii HOM05D000176 ORTHO05D014553 1.4e-19 100.5 50 96.0
Solyc10g049667.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.1e-19 98.2 175 40.0
Sopen09g010870 Solanum pennellii HOM05D000176 ORTHO05D000106 7.1e-19 98.2 149 40.9
PGSC0003DMG400021588 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.0e-18 95.1 172 35.5
Solyc02g065114.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.3e-16 88.2 69 59.4
PGSC0003DMG400006264 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.8e-15 86.3 59 67.8
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 6.2e-15 85.1 139 39.6
CAN.G1612.3 Capsicum annuum HOM05D000176 ORTHO05D000106 8.1e-15 84.7 64 62.5
CAN.G1102.4 Capsicum annuum HOM05D000176 ORTHO05D014553 1.8e-14 83.6 65 58.5
CAN.G1611.3 Capsicum annuum HOM05D000176 ORTHO05D014553 1.0e-09 67.8 63 61.9
Solyc11g044457.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.7e-09 65.1 80 48.8
CAN.G650.30 Capsicum annuum HOM05D000176 ORTHO05D014553 9.6e-08 61.2 63 58.7
Solyc02g065112.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.1e-07 60.1 46 63.0
PGSC0003DMG400025677 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.8e-07 58.9 35 74.3
CAN.G1218.17 Capsicum annuum HOM05D000176 ORTHO05D014553 1.1e-06 57.8 51 62.7
Solyc08g016802.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.4e-06 56.6 31 87.1


User provided reference genes

Program Settings