Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.7e-211 738.4 372 100.0
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 3.5e-211 738.0 372 99.7
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.8e-206 720.7 376 96.8
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.2e-200 703.0 376 94.4
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 9.9e-198 693.3 376 92.8
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.9e-188 662.5 376 88.8
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.8e-184 647.9 397 83.9
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.3e-170 603.2 368 82.3
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 3.7e-160 568.5 386 76.2
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.2e-158 563.5 377 76.4
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.4e-158 562.0 373 76.1
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.4e-158 562.0 378 75.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.5e-158 561.6 377 76.7
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.7e-157 559.7 373 75.3
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.0e-157 558.1 372 74.5
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 6.5e-157 557.8 365 77.8
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.4e-156 556.6 363 77.7
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 5.5e-156 554.7 371 74.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.1e-155 552.7 389 72.8
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.1e-155 552.7 359 77.2
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.7e-155 552.4 365 77.3
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.7e-155 552.4 369 74.8
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.7e-155 552.4 382 73.3
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 4.6e-155 551.6 381 74.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.0e-154 550.4 371 76.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.8e-154 549.7 389 72.8
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 5.1e-154 548.1 381 72.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 5.1e-154 548.1 384 73.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 8.7e-154 547.4 382 73.0
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.1e-153 547.0 389 71.7
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.9e-153 546.2 357 75.9
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.9e-153 546.2 389 72.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.9e-153 546.2 366 75.1
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 2.5e-153 545.8 343 79.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 4.3e-153 545.0 382 73.0
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.3e-153 545.0 390 72.1
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.7e-153 544.7 355 76.3
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 9.7e-153 543.9 353 77.9
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 9.7e-153 543.9 353 77.6
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-152 542.3 366 74.3
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 3.7e-152 542.0 373 73.5
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.7e-152 542.0 373 74.0
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 4.8e-152 541.6 382 73.0
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 6.3e-152 541.2 369 74.0
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 6.3e-152 541.2 369 74.0
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.4e-151 540.0 373 73.5
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-151 540.0 373 73.5
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-151 539.7 373 73.5
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.1e-151 538.9 369 74.0
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.1e-151 538.5 354 76.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 6.9e-151 537.7 367 74.7
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-150 537.0 361 74.5
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-150 537.0 370 74.6
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.5e-150 536.6 390 71.3
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.6e-150 535.8 385 71.4
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.4e-150 535.4 365 76.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.9e-150 534.6 384 71.4
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.9e-150 534.6 375 73.9
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.7e-150 534.3 368 73.9
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.0e-149 533.9 369 74.3
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.3e-149 533.5 342 76.9
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-149 533.5 408 68.9
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.7e-149 533.1 357 75.6
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 3.8e-149 531.9 364 73.4
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 3.8e-149 531.9 347 76.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 5.0e-149 531.6 369 73.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 6.5e-149 531.2 355 74.6
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-148 530.0 352 75.3
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.4e-148 530.0 354 76.0
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 2.5e-148 529.3 383 73.1
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 3.2e-148 528.9 365 75.6
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.2e-148 528.5 362 73.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 5.5e-148 528.1 355 74.4
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 5.5e-148 528.1 356 74.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 7.2e-148 527.7 383 71.5
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 7.2e-148 527.7 355 74.9
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 7.2e-148 527.7 380 71.8
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 9.4e-148 527.3 353 74.8
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.6e-147 526.6 355 75.2
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.6e-147 526.6 357 74.8
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.1e-147 526.2 350 74.9
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.9e-147 524.2 387 69.8
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 7.9e-147 524.2 381 70.1
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-146 523.9 353 73.4
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.4e-146 523.5 372 73.1
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.8e-146 523.1 368 72.3
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.9e-146 521.9 371 72.5
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.7e-146 521.2 371 72.5
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.1e-145 520.4 354 74.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.6e-145 519.2 371 72.2
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 2.6e-145 519.2 385 71.2
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 5.7e-145 518.1 385 71.2
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.4e-145 517.7 339 75.5
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.7e-145 517.3 388 69.6
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.7e-145 517.3 388 69.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 9.7e-145 517.3 385 69.4
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.3e-144 516.9 385 69.6
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.7e-144 515.4 357 74.2
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.8e-144 515.0 346 73.7
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 8.2e-144 514.2 384 69.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.8e-143 513.1 366 71.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.8e-143 513.1 387 69.3
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.4e-143 512.7 365 71.2
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 6.9e-143 511.1 403 68.0
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 9.1e-143 510.8 334 74.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.2e-142 510.4 338 76.9
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.5e-142 510.0 387 69.0
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.4e-142 508.8 387 69.0
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.3e-141 506.9 357 72.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.7e-141 506.5 354 71.8
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.7e-141 506.5 329 75.1
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 2.2e-141 506.1 315 76.2
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 5.0e-141 505.0 374 71.4
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.9e-140 503.1 303 78.9
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 2.5e-140 502.7 379 69.7
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 5.5e-140 501.5 360 71.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 7.2e-140 501.1 380 68.2
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.6e-139 500.0 312 77.2
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 3.9e-138 495.4 312 76.0
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 9.7e-137 490.7 378 66.7
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.7e-136 490.0 381 67.5
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 8.2e-136 487.6 352 69.3
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.2e-134 483.8 475 56.8
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.3e-133 480.3 316 75.0
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.9e-133 479.2 379 67.5
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.2e-131 473.8 381 66.1
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 5.2e-130 468.4 271 81.9
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.8e-128 461.8 304 76.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.2e-126 457.2 354 67.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 3.8e-125 452.2 382 63.6
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.1e-124 450.7 321 65.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.5e-124 450.3 295 76.3
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 4.2e-124 448.7 313 65.8
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 3.0e-122 442.6 273 77.3
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.6e-121 439.5 383 63.4
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.5e-121 438.0 317 71.9
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.8e-120 435.3 309 70.2
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 9.1e-119 431.0 314 64.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.2e-118 430.6 333 62.2
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.0e-117 427.6 357 59.9
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.2e-116 422.2 251 81.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.0e-114 416.0 350 60.6
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.2e-113 414.1 322 63.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.3e-112 408.3 417 55.6
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 9.2e-111 404.4 360 58.9
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.7e-110 402.9 334 59.3
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.0e-109 401.0 238 84.5
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.6e-102 377.1 368 56.5
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 5.0e-101 372.1 221 81.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.4e-90 337.4 299 56.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 6.0e-86 322.0 221 68.8
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.6e-77 292.0 245 64.9
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 7.1e-63 245.4 150 78.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.3e-61 241.1 366 43.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.4e-55 221.1 167 63.5
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.0e-53 214.9 171 66.7
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 3.1e-42 176.8 175 55.4
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.5e-31 140.6 89 76.4
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 9.4e-31 138.7 280 32.5
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.8e-27 126.3 101 63.4
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.0e-24 118.6 354 28.8
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.0e-24 116.3 250 36.8
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.2e-22 111.7 313 27.5
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.4e-21 108.2 65 75.4
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 7.7e-17 92.4 61 75.4
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 7.7e-17 92.4 61 75.4
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.9e-16 90.5 61 75.4
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-15 88.6 59 72.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.2e-15 86.7 91 59.3
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.2e-14 85.1 60 71.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.7e-14 84.0 377 24.1
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 2.3e-13 80.9 90 55.6
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 4.1e-10 70.1 151 29.1
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 7.7e-09 65.9 33 87.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.9e-07 61.2 41 68.3
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 3.2e-07 60.5 41 65.9
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.2e-07 60.1 39 69.2
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 9.4e-07 58.9 35 74.3


User provided reference genes

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