Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g041030.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 3.8e-60 234.6 113 100.0
PGSC0003DMG400018920 Solanum tuberosum HOM05D001883 ORTHO05D002184 5.5e-51 204.1 108 88.9
PGSC0003DMG400021957 Solanum tuberosum HOM05D001883 ORTHO05D002184 2.7e-50 201.8 108 88.0
Sopen04g011170 Solanum pennellii HOM05D001883 ORTHO05D002184 4.0e-49 198.0 108 88.0
PGSC0003DMG400013762 Solanum tuberosum HOM05D001883 ORTHO05D002184 4.0e-49 198.0 108 86.1
Sopen09g011350 Solanum pennellii HOM05D001883 ORTHO05D002184 2.2e-47 192.2 108 86.1
Sopen01g013150 Solanum pennellii HOM05D001883 ORTHO05D002184 1.2e-45 186.4 105 86.7
Sopen04g020040 Solanum pennellii HOM05D001883 ORTHO05D002184 1.2e-45 186.4 105 86.7
Solyc04g053070.2 Solanum lycopersicum HOM05D001883 ORTHO05D002184 2.2e-39 165.6 97 83.5
Nitab4.5_0001295g0190 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.9e-19 99.4 107 44.9
Nitab4.5_0002500g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.3e-19 97.4 105 46.7
Nitab4.5_0003471g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-17 93.6 107 43.0
Nitab4.5_0005946g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.0e-17 91.7 89 49.4
Nitab4.5_0002127g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.2e-17 91.3 104 43.3
Nitab4.5_0000838g0090 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.2e-16 90.1 92 47.8
Nitab4.5_0000543g0210 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.4e-16 88.6 107 42.1
Nitab4.5_0012297g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.5e-16 87.4 105 43.8
Nitab4.5_0007722g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.8e-16 87.0 94 45.7
Nitab4.5_0004027g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.3e-15 84.0 74 48.6
Nitab4.5_0018050g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.1e-14 81.6 85 48.2
Nitab4.5_0013253g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-14 80.5 92 45.7
Peaxi162Scf00040g00322 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00057g02229 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00069g01727 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00087g00311 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00088g01022 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00178g00136 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00297g00214 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00310g00821 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00471g00711 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00760g00122 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00802g00123 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00823g00011 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf00901g00213 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Peaxi162Scf01064g00116 Petunia axillaris HOM05D001883 ORTHO05D002184 6.0e-13 77.8 94 40.4
Nitab4.5_0007258g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.0e-12 77.0 105 39.0
Peaxi162Scf00303g01113 Petunia axillaris HOM05D001883 ORTHO05D002184 1.3e-12 76.6 94 40.4
Nitab4.5_0002472g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-12 76.3 92 41.3
Peaxi162Scf00429g00715 Petunia axillaris HOM05D001883 ORTHO05D002184 3.0e-12 75.5 92 41.3
Nitab4.5_0000221g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.0e-12 74.7 59 50.8
Peaxi162Scf00673g00219 Petunia axillaris HOM05D001883 ORTHO05D002184 5.0e-12 74.7 92 40.2
Peaxi162Scf00780g00416 Petunia axillaris HOM05D001883 ORTHO05D002184 6.6e-12 74.3 90 36.7
Nitab4.5_0005081g0080 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.3e-11 72.0 94 36.2
Nitab4.5_0004047g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.6e-11 71.2 109 34.9
Nitab4.5_0004598g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.6e-11 71.2 87 37.9
Peaxi162Scf00229g01011 Petunia axillaris HOM05D001883 ORTHO05D002184 1.2e-10 70.1 73 41.1
Peaxi162Scf00417g01015 Petunia axillaris HOM05D001883 ORTHO05D002184 1.2e-10 70.1 64 45.3
Peaxi162Scf00538g00714 Petunia axillaris HOM05D001883 ORTHO05D002184 1.2e-10 70.1 73 42.5
Nitab4.5_0000835g0090 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-10 69.3 58 48.3
Nitab4.5_0005943g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-10 69.3 85 36.5
Nitab4.5_0005967g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.7e-10 68.2 110 33.6
PGSC0003DMG400046642 Solanum tuberosum HOM05D001883 ORTHO05D002184 4.7e-10 68.2 42 71.4
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.2e-10 67.8 84 38.1
Peaxi162Scf00221g00028 Petunia axillaris HOM05D001883 ORTHO05D002184 6.2e-10 67.8 92 37.0
Peaxi162Scf00588g00074 Petunia axillaris HOM05D001883 ORTHO05D002184 6.2e-10 67.8 78 39.7
Nitab4.5_0005463g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.1e-10 67.4 77 39.0
Nitab4.5_0007045g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.1e-10 67.4 92 40.2
Peaxi162Scf00128g00098 Petunia axillaris HOM05D001883 ORTHO05D002184 8.1e-10 67.4 75 38.7
Peaxi162Scf00793g00320 Petunia axillaris HOM05D001883 ORTHO05D002184 8.1e-10 67.4 75 38.7
Peaxi162Scf11505g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 8.1e-10 67.4 75 38.7
Nitab4.5_0000168g0110 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-09 67.0 93 34.4
Nitab4.5_0004252g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.4e-09 66.6 79 38.0
Peaxi162Scf03301g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-09 66.6 82 37.8
Nitab4.5_0001226g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.8e-09 66.2 84 36.9
Nitab4.5_0007255g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.8e-09 66.2 76 39.5
Peaxi162Scf00193g00720 Petunia axillaris HOM05D001883 ORTHO05D002184 1.8e-09 66.2 78 37.2
Nitab4.5_0001227g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.1e-09 65.5 97 39.2
Peaxi162Scf00334g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-09 65.5 81 37.0
Nitab4.5_0001238g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.0e-09 65.1 95 33.7
Nitab4.5_0006171g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.0e-09 65.1 91 35.2
Peaxi162Scf00330g00910 Petunia axillaris HOM05D001883 ORTHO05D002184 4.0e-09 65.1 78 37.2
Solyc04g017665.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 4.0e-09 65.1 80 40.0
Solyc12g040648.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 4.0e-09 65.1 80 40.0
Solyc01g100107.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 5.2e-09 64.7 80 40.0
Nitab4.5_0000110g0350 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.8e-09 64.3 95 37.9
Nitab4.5_0007431g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.8e-09 64.3 98 34.7
Nitab4.5_0007686g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.8e-09 64.3 95 35.8
Nitab4.5_0013483g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.8e-09 64.3 62 41.9
Peaxi162Scf00186g00004 Petunia axillaris HOM05D001883 ORTHO05D002184 6.8e-09 64.3 62 45.2
Nitab4.5_0000131g0190 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.9e-09 63.9 62 40.3
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 8.9e-09 63.9 82 39.0
Peaxi162Scf00263g00027 Petunia axillaris HOM05D001883 ORTHO05D002184 8.9e-09 63.9 63 42.9
Peaxi162Scf00951g00214 Petunia axillaris HOM05D001883 ORTHO05D002184 8.9e-09 63.9 77 41.6
Peaxi162Scf00805g00517 Petunia axillaris HOM05D001883 ORTHO05D002184 1.2e-08 63.5 78 37.2
Peaxi162Scf00003g00007 Petunia axillaris HOM05D001883 ORTHO05D002184 1.5e-08 63.2 78 37.2
Peaxi162Scf00391g00422 Petunia axillaris HOM05D001883 ORTHO05D002184 1.5e-08 63.2 77 36.4
Peaxi162Scf00543g00417 Petunia axillaris HOM05D001883 ORTHO05D002184 2.0e-08 62.8 95 34.7
Peaxi162Scf00987g00035 Petunia axillaris HOM05D001883 ORTHO05D002184 2.0e-08 62.8 68 39.7
Nitab4.5_0004146g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.6e-08 62.4 61 42.6
Nitab4.5_0012366g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.4e-08 62.0 91 33.0
Peaxi162Scf00491g00037 Petunia axillaris HOM05D001883 ORTHO05D002184 3.4e-08 62.0 75 40.0
Peaxi162Scf00916g00123 Petunia axillaris HOM05D001883 ORTHO05D002184 3.4e-08 62.0 78 35.9
Nitab4.5_0004439g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.4e-08 61.6 97 34.0
Peaxi162Scf00005g04013 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00034g00158 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00248g00115 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00322g00085 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00344g00410 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00360g00012 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00395g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00408g00847 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 80 38.8
Peaxi162Scf00434g00729 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Peaxi162Scf00966g00117 Petunia axillaris HOM05D001883 ORTHO05D002184 4.4e-08 61.6 95 34.7
Nitab4.5_0011861g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.5e-08 60.8 62 40.3
Peaxi162Scf00359g00311 Petunia axillaris HOM05D001883 ORTHO05D002184 7.5e-08 60.8 63 39.7
Nitab4.5_0007534g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.9e-08 60.5 87 37.9
Nitab4.5_0007514g0080 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-07 60.1 77 44.2
Nitab4.5_0007967g0050 Nicotiana tabacum HOM05D003452 ORTHO05D004046 1.3e-07 60.1 60 43.3
Nitab4.5_0002367g0200 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-07 59.7 84 35.7
Nitab4.5_0002898g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-07 59.7 95 35.8
Nitab4.5_0003017g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-07 59.7 80 36.2
Nitab4.5_0010443g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-07 59.7 95 35.8
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-07 59.7 59 40.7
Nitab4.5_0001232g0080 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-07 58.9 84 33.3
Nitab4.5_0003833g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-07 58.9 62 38.7
Nitab4.5_0000654g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.7e-07 58.5 71 36.6
Nitab4.5_0019234g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.7e-07 58.5 96 34.4
Peaxi162Scf00023g02224 Petunia axillaris HOM05D001883 ORTHO05D002184 3.7e-07 58.5 70 38.6
Peaxi162Scf00288g00007 Petunia axillaris HOM05D001883 ORTHO05D002184 3.7e-07 58.5 77 37.7
Nitab4.5_0000036g0280 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.9e-07 58.2 72 36.1
Nitab4.5_0001647g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.9e-07 58.2 77 39.0
Peaxi162Scf00064g00204 Petunia axillaris HOM05D000017 ORTHO05D000308 4.9e-07 58.2 72 37.5
Nitab4.5_0007546g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.4e-07 57.8 62 38.7
Nitab4.5_0008822g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.4e-07 57.8 78 33.3
Nitab4.5_0009994g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.4e-07 57.8 87 34.5
Peaxi162Scf00034g00159 Petunia axillaris HOM05D001883 ORTHO05D002184 6.4e-07 57.8 90 34.4
Peaxi162Scf00116g00813 Petunia axillaris HOM05D001883 ORTHO05D002184 6.4e-07 57.8 95 34.7
Nitab4.5_0000008g0480 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.3e-07 57.4 81 34.6
Nitab4.5_0008117g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.3e-07 57.4 86 36.0
Nitab4.5_0010929g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.3e-07 57.4 94 34.0
Nitab4.5_0003769g0140 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-06 57.0 100 29.0
Nitab4.5_0007410g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-06 57.0 72 37.5
Peaxi162Scf00136g00616 Petunia axillaris HOM05D001883 ORTHO05D002184 1.1e-06 57.0 92 37.0
Peaxi162Scf00293g00112 Petunia axillaris HOM05D001883 ORTHO05D002184 1.1e-06 57.0 92 37.0
Peaxi162Scf00407g00518 Petunia axillaris HOM05D001883 ORTHO05D002184 1.1e-06 57.0 57 40.4
Nitab4.5_0004720g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.4e-06 56.6 85 35.3
Nitab4.5_0000907g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.9e-06 56.2 72 37.5
Peaxi162Scf00252g00021 Petunia axillaris HOM05D000017 ORTHO05D000308 1.9e-06 56.2 55 38.2
Nitab4.5_0000697g0220 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 55.8 78 32.1
Nitab4.5_0001652g0110 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 55.8 84 29.8
Nitab4.5_0002647g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 55.8 106 33.0
Nitab4.5_0007579g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 55.8 97 37.1
Nitab4.5_0000254g0200 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.2e-06 55.5 70 38.6
Nitab4.5_0000890g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.2e-06 55.5 76 34.2
Nitab4.5_0009420g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.1e-06 55.1 71 33.8
Peaxi162Scf00066g00114 Petunia axillaris HOM05D001883 ORTHO05D002184 4.1e-06 55.1 74 37.8
Peaxi162Scf01070g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 4.1e-06 55.1 74 37.8
Nitab4.5_0005376g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.4e-06 54.7 89 30.3
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 5.4e-06 54.7 79 34.2
Peaxi162Scf43039g00001 Petunia axillaris HOM05D001883 ORTHO05D002184 5.4e-06 54.7 72 37.5
Nitab4.5_0001647g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.1e-06 54.3 69 39.1
Nitab4.5_0000066g0200 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 53.9 90 34.4
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 53.9 59 37.3
Nitab4.5_0001476g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 53.9 87 32.2
Nitab4.5_0009462g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 53.9 84 33.3


User provided reference genes

Program Settings