Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g039610.1 Solanum lycopersicum HOM05D003491 ORTHO05D391577 7.0e-27 123.2 64 100.0
ECA233G0626 Erigeron canadensis HOM05D003491 ORTHO05D004293 4.1e-11 70.9 63 60.3
Gohir.D03G064500 Gossypium hirsutum HOM05D003491 ORTHO05D004293 4.1e-11 70.9 63 60.3
Gorai.013G110300 Gossypium raimondii HOM05D003491 ORTHO05D004293 4.1e-11 70.9 63 60.3
Lsat_1_v5_gn_6_21641 Lactuca sativa HOM05D003491 ORTHO05D004293 4.1e-11 70.9 63 60.3
HPP92_003632 Vanilla planifolia HOM05D003491 ORTHO05D004293 5.4e-11 70.5 63 60.3
HPP92_003644 Vanilla planifolia HOM05D003491 ORTHO05D004293 5.4e-11 70.5 63 60.3
Cfa013196 Carpinus fangiana HOM05D003491 ORTHO05D004293 7.0e-11 70.1 63 60.3
Haze_21598 Corylus avellana HOM05D003491 ORTHO05D004293 7.0e-11 70.1 63 60.3
Nn1g04228 Nelumbo nucifera HOM05D003491 ORTHO05D004293 7.0e-11 70.1 63 58.7
CANSAT54G2758 Cannabis sativa HOM05D003491 ORTHO05D004293 9.2e-11 69.7 63 58.7
Gohir.A02G109706 Gossypium hirsutum HOM05D003491 ORTHO05D004293 9.2e-11 69.7 63 58.7
TAR626G1382 Trochodendron aralioides HOM05D003491 ORTHO05D004293 9.2e-11 69.7 63 58.7
Cc04_g03810 Coffea canephora HOM05D003491 ORTHO05D004293 1.6e-10 68.9 63 58.7
Dinv11598 Davidia involucrata HOM05D003491 ORTHO05D004293 1.6e-10 68.9 63 58.7
Lj5g0005859 Lotus japonicus HOM05D003491 ORTHO05D004293 1.6e-10 68.9 63 58.7
Manes.16G118100 Manihot esculenta HOM05D003491 ORTHO05D004293 1.6e-10 68.9 63 58.7
QL07p015653 Quercus lobata HOM05D003491 ORTHO05D004293 1.6e-10 68.9 63 58.7
Actinidia14629 Actinidia chinensis HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
Actinidia15699 Actinidia chinensis HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
Eucgr.C02831 Eucalyptus grandis HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 57.1
Gohir.A08G091800 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
Gohir.D08G107100 Gossypium hirsutum HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
Gorai.004G114500 Gossypium raimondii HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
MD08G1141700 Malus domestica HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 58.7
Manes.03G018400 Manihot esculenta HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 57.1
unitig_21.g20349 Utricularia gibba HOM05D003491 ORTHO05D004293 2.0e-10 68.6 63 57.1
MSTRG.11107 Avicennia marina HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 57.1
MSTRG.22716 Avicennia marina HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 57.1
EL10As1g23116 Beta vulgaris HOM05D003491 ORTHO05D004293 2.7e-10 68.2 51 66.7
CSS0031636 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
CAN.G395.36 Capsicum annuum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
ClCG05G017160 Citrullus lanatus HOM05D003491 ORTHO05D004293 2.7e-10 68.2 58 58.6
Ciclev10009643m.g Citrus clementina HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
COL.COLO4_24008 Corchorus olitorius HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Migut.I00813 Erythranthe guttata HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 57.1
Hma1.2p1_0000F.1_g001030 Hydrangea macrophylla HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Lj5A66T58 Lonicera japonica HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
MBI04_g33817_MAGBIO Magnolia biondii HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Nitab4.5_0000620g0180 Nicotiana tabacum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Nitab4.5_0009276g0010 Nicotiana tabacum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Potri.018G032600 Populus trichocarpa HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Sed0016723 Sechium edule HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Hund25698 Selenicereus undatus HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 57.1
Solyc06g067880.3 Solanum lycopersicum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
PGSC0003DMG400007564 Solanum tuberosum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
PGSC0003DMG400028549 Solanum tuberosum HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
TWI32G0730 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
TWI34G0357 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
TWI63G0930 Tripterygium wilfordii HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
TAR636G0216 Trochodendron aralioides HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 58.7
Zm00001eb161810 Zea mays HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 55.6
Zm00001eb357970 Zea mays HOM05D003491 ORTHO05D004293 2.7e-10 68.2 63 55.6
Ah.12g063740 Amaranthus hybridus HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 57.1
CSS0016532 Camellia sinensis var. sinensis HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 58.7
Cpa.g.sc91.29 Carica papaya HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 58.7
PSO339G4791 Papaver somniferum HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 57.1
PSO801G0434 Papaver somniferum HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 57.1
Sopen06g025160 Solanum pennellii HOM05D003491 ORTHO05D004293 3.5e-10 67.8 63 57.1
Actinidia13267 Actinidia chinensis HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
MSTRG.9444 Avicennia marina HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 55.6
CiPaw.08G014200 Carya illinoinensis HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
DCAR_006243 Daucus carota HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
Hma1.2p1_0007F.1_g005180 Hydrangea macrophylla HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
Potri.006G248700 Populus trichocarpa HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
Rhsim07G0146800 Rhododendron simsii HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
Thecc.09G147300 Theobroma cacao HOM05D003491 ORTHO05D004293 4.6e-10 67.4 63 57.1
CiPaw.07G219300 Carya illinoinensis HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 57.1
Peaxi162Scf00207g00754 Petunia axillaris HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 57.1
RcHm_v2.0_Chr6g0298821 Rosa chinensis HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 57.1
SalBow2G1989 Salvia bowleyana HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 55.6
SGA_v2.0_scaffold5G02647 Striga asiatica HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 55.6
vmacro12625 Vaccinium macrocarpon HOM05D003491 ORTHO05D004293 6.0e-10 67.0 63 57.1
BcaNung04516 Brassica carinata HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 55.6
ECA232G3542 Erigeron canadensis HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
FvH4_2g29800 Fragaria vesca HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
HanXRQChr03g0081341 Helianthus annuus HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
Nitab4.5_0000508g0240 Nicotiana tabacum HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
Nitab4.5_0002339g0040 Nicotiana tabacum HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
PGR044G2143 Punica granatum HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
THA.LOC104803630 Tarenaya hassleriana HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 55.6
GSVIVG01035775001 Vitis vinifera HOM05D003491 ORTHO05D004293 7.8e-10 66.6 63 57.1
Dinv30193 Davidia involucrata HOM05D004398 ORTHO05D004293 1.0e-09 66.2 63 57.1
Duzib150G0462 Durio zibethinus HOM05D003491 ORTHO05D004293 1.0e-09 66.2 63 57.1
Lj9A504T65 Lonicera japonica HOM05D003491 ORTHO05D004293 1.0e-09 66.2 63 57.1
TAR383G0278 Trochodendron aralioides HOM05D003491 ORTHO05D004293 1.0e-09 66.2 63 57.1
GSVIVG01017212001 Vitis vinifera HOM05D003491 ORTHO05D004293 1.0e-09 66.2 63 57.1
Rhsim02G0193000 Rhododendron simsii HOM05D003491 ORTHO05D004293 1.3e-09 65.9 63 55.6
Sc23g0006960 Simmondsia chinensis HOM05D003491 ORTHO05D004293 1.3e-09 65.9 63 54.0
Lsat_1_v5_gn_4_104721 Lactuca sativa HOM05D003491 ORTHO05D004293 1.7e-09 65.5 63 55.6
MD15G1118200 Malus domestica HOM05D003491 ORTHO05D004293 1.7e-09 65.5 63 55.6
Nn8g39341 Nelumbo nucifera HOM05D003491 ORTHO05D004293 1.7e-09 65.5 63 55.6
Prupe.1G471600 Prunus persica HOM05D003491 ORTHO05D004293 1.7e-09 65.5 63 55.6
Sed0008081 Sechium edule HOM05D003491 ORTHO05D004293 1.7e-09 65.5 63 55.6
CDE02G0717 Ceratophyllum demersum HOM05D003491 ORTHO05D004293 2.3e-09 65.1 63 55.6
Duzib168G0366 Durio zibethinus HOM05D003491 ORTHO05D004293 3.0e-09 64.7 63 57.1
Sabra06G0194600 Salix brachista HOM05D003491 ORTHO05D004293 6.6e-09 63.5 63 52.4
MELO3C003677.2 Cucumis melo HOM05D003491 ORTHO05D004293 8.6e-09 63.2 63 54.0
Ca_12922_v3 Cicer arietinum L. HOM05D003491 ORTHO05D004293 1.1e-08 62.8 63 52.4
Os01g0610100 Oryza sativa ssp. japonica HOM05D003491 ORTHO05D004293 1.5e-08 62.4 63 50.8
vmacro11129 Vaccinium macrocarpon HOM05D003491 ORTHO05D004293 1.5e-08 62.4 51 58.8
CsaV3_3G046610 Cucumis sativus L. HOM05D003491 ORTHO05D004293 1.9e-08 62.0 63 54.0
ClCG08G013010 Citrullus lanatus HOM05D003491 ORTHO05D004293 7.3e-08 60.1 63 55.6
MELO3C011225.2 Cucumis melo HOM05D003491 ORTHO05D004293 7.3e-08 60.1 63 55.6
CsaV3_2G031740 Cucumis sativus L. HOM05D003491 ORTHO05D004293 7.3e-08 60.1 63 55.6
Sed0021950 Sechium edule HOM05D003491 ORTHO05D004293 1.2e-07 59.3 63 54.0
SEGI_03101 Sequoiadendron giganteum HOM05D003491 ORTHO05D004293 2.1e-07 58.5 63 46.0
Oeu052308.2 Olea europaea HOM05D003491 ORTHO05D004293 6.2e-07 57.0 81 44.4
AUR62041851 Chenopodium quinoa HOM05D003491 ORTHO05D004293 8.1e-07 56.6 52 59.6
SalBow2G0098 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.1e-06 56.2 62 50.0
BraA01t00554Z Brassica rapa HOM05D003491 ORTHO05D004293 2.3e-06 55.1 62 51.6
GSVIVG01036835001 Vitis vinifera HOM05D003491 ORTHO05D440072 2.3e-06 55.1 58 55.2
BraA08t33768Z Brassica rapa HOM05D003491 ORTHO05D004293 3.1e-06 54.7 86 40.7
FAN15G2480 Fragaria x ananassa HOM05D003491 ORTHO05D004293 3.1e-06 54.7 51 58.8
FAN24G1679 Fragaria x ananassa HOM05D003491 ORTHO05D004293 3.1e-06 54.7 51 58.8
FAN27G2386 Fragaria x ananassa HOM05D003491 ORTHO05D004293 3.1e-06 54.7 51 58.8
SGA_v2.0_scaffold37G14799 Striga asiatica HOM05D003491 ORTHO05D004293 3.1e-06 54.7 62 48.4
BraA03t15192Z Brassica rapa HOM05D003491 ORTHO05D004293 4.0e-06 54.3 52 55.8
C01p06490 Brassica napus HOM05D003491 ORTHO05D004293 6.8e-06 53.5 63 49.2
BolC1t00643H Brassica oleracea HOM05D003491 ORTHO05D004293 6.8e-06 53.5 63 49.2


User provided reference genes

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