Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g039380.3 Solanum lycopersicum HOM05D002237 ORTHO05D002213 7.2e-71 270.8 170 100.0
Sopen07g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 6.6e-56 221.1 197 77.7
PGSC0003DMG400017835 Solanum tuberosum HOM05D002237 ORTHO05D002213 2.0e-41 172.9 199 59.8
Nitab4.5_0006570g0030 Nicotiana tabacum HOM05D002237 ORTHO05D002213 6.9e-21 104.8 261 36.0
Solyc05g018820.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 3.8e-19 99.0 188 39.9
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 4.9e-19 98.6 192 39.1
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 8.4e-19 97.8 235 34.9
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 2.7e-17 92.8 238 34.0
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 6.0e-17 91.7 233 35.2
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 1.3e-16 90.5 194 37.1
PGSC0003DMG400021389 Solanum tuberosum HOM05D002237 ORTHO05D002213 1.3e-16 90.5 213 36.2
Peaxi162Scf00259g00111 Petunia axillaris HOM05D002237 ORTHO05D002213 5.1e-16 88.6 245 35.1
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 2.6e-12 76.3 197 33.5
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 3.4e-12 75.9 119 43.7
Hma1.2p1_0798F.1_g219880 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.8e-11 72.4 166 36.1
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 2.4e-10 69.7 199 32.7
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 2.4e-10 69.7 191 33.0
Oeu041231.1 Olea europaea HOM05D002237 ORTHO05D002213 9.3e-10 67.8 191 32.5
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 3.5e-09 65.9 164 31.7
DCAR_030907 Daucus carota HOM05D002237 ORTHO05D002213 7.9e-09 64.7 172 33.1
Hma1.2p1_0798F.1_g219850 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 7.9e-09 64.7 228 29.8
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 3.9e-08 62.4 186 32.8
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 8.7e-08 61.2 251 27.1
vmacro17244 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 1.5e-07 60.5 265 27.2
Cc06_g11460 Coffea canephora HOM05D002237 ORTHO05D002213 2.5e-07 59.7 221 28.5
ECA240G0667 Erigeron canadensis HOM05D002237 ORTHO05D002213 3.3e-07 59.3 55 54.5
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.3e-07 59.3 82 46.3
SEGI_35235 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 5.6e-07 58.5 168 31.0
HanXRQChr03g0060491 Helianthus annuus HOM05D002237 ORTHO05D002213 7.4e-07 58.2 71 46.5
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 9.6e-07 57.8 210 29.5
SEGI_14039 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 1.3e-06 57.4 169 30.8
SEGI_05314 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 1.6e-06 57.0 169 30.8
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 2.1e-06 56.6 72 47.2
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 2.8e-06 56.2 74 47.3
Lsat_1_v5_gn_6_13421 Lactuca sativa HOM05D002237 ORTHO05D002213 2.8e-06 56.2 98 43.9
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 3.7e-06 55.8 212 26.4
Oeu041236.1 Olea europaea HOM05D002237 ORTHO05D002213 3.7e-06 55.8 199 42.7
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 3.7e-06 55.8 78 44.9
VMungo0647G2239 Vigna mungo HOM05D002237 ORTHO05D002213 3.7e-06 55.8 84 41.7
AL4G18280 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 4.8e-06 55.5 247 25.1
Oeu041228.1 Olea europaea HOM05D002237 ORTHO05D002213 4.8e-06 55.5 195 29.2
Actinidia39713 Actinidia chinensis HOM05D002237 ORTHO05D002213 6.2e-06 55.1 83 44.6
Cc08_g10640 Coffea canephora HOM05D002237 ORTHO05D002213 6.2e-06 55.1 68 50.0
CsaV3_4G035640 Cucumis sativus L. HOM05D002237 ORTHO05D002213 6.2e-06 55.1 72 47.2
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 6.2e-06 55.1 67 46.3
MELO3C016871.2 Cucumis melo HOM05D002237 ORTHO05D002213 8.1e-06 54.7 100 38.0


User provided reference genes

Program Settings