Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-55 217.2 103 100.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-26 121.7 68 85.3
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-25 118.6 201 35.8
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.6e-25 118.2 164 42.1
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.6e-25 118.2 68 82.4
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-23 112.1 170 40.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-23 110.2 66 74.2
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-22 109.8 68 75.0
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-22 109.0 195 34.4
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-20 101.7 67 68.7
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 4.4e-15 84.7 48 75.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-15 84.0 67 55.2
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 8.4e-14 80.5 66 53.0
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-13 79.7 67 52.2
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-13 79.0 67 53.7
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-13 78.2 66 53.0
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 5.4e-13 77.8 66 53.0
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-13 77.8 67 52.2
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 6.0e-12 74.3 66 48.5
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 7.8e-12 73.9 47 68.1
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.0e-11 73.6 66 47.0
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.3e-11 72.4 67 47.8
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.7e-11 70.5 67 50.7
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 9.6e-10 67.0 73 43.8
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 9.6e-10 67.0 73 43.8
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 9.6e-10 67.0 73 43.8
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.3e-09 66.6 77 42.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 66.6 66 45.5
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 66.6 73 43.8
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 66.6 66 45.5
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 66.6 66 45.5
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 1.3e-09 66.6 66 45.5
Nitab4.5_0000037g0270 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.3e-09 66.6 67 46.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-09 66.2 78 43.6
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-09 66.2 48 60.4
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.1e-09 65.9 62 45.2
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 3.6e-09 65.1 73 43.8
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 3.6e-09 65.1 73 43.8
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-09 64.7 66 43.9
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 6.2e-09 64.3 65 43.1
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 8.1e-09 63.9 66 43.9
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.1e-09 63.9 65 43.1
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-08 63.2 77 41.6
Nitab4.5_0000970g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.4e-08 63.2 50 56.0
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 1.8e-08 62.8 73 42.5
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-08 62.0 35 77.1
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 4.0e-08 61.6 35 74.3
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-08 61.6 35 74.3
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 5.3e-08 61.2 66 43.9
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 5.3e-08 61.2 73 41.1
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 6.9e-08 60.8 66 42.4
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 6.9e-08 60.8 65 40.0
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.0e-08 60.5 71 42.3
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-07 60.1 35 77.1
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 2.0e-07 59.3 68 41.2
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-07 59.3 35 68.6
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.6e-07 58.9 65 43.1
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-07 58.2 34 70.6
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 5.8e-07 57.8 66 40.9
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.8e-07 57.8 65 40.0
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.6e-07 57.4 35 71.4
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-07 57.4 35 68.6
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-07 57.0 71 40.8
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.3e-06 56.6 65 38.5
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-06 56.6 55 47.3
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-06 56.6 47 53.2
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-06 56.6 34 70.6
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 2.2e-06 55.8 67 37.3
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 3.8e-06 55.1 68 30.9
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 8.4e-06 53.9 67 35.8
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 8.4e-06 53.9 67 35.8
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 8.4e-06 53.9 67 35.8


User provided reference genes

Program Settings