Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 0.0e+00 1194.9 641 100.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.9e-298 1028.1 664 85.5
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 8.9e-247 857.1 515 92.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.9e-233 812.8 662 71.3
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.6e-195 685.3 796 55.0
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.0e-186 656.0 819 52.4
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.0e-167 591.7 812 50.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.1e-78 297.7 670 34.5
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 3.7e-59 233.8 724 30.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 2.0e-57 228.0 704 31.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 3.5e-57 227.3 630 32.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 9.4e-55 219.2 658 29.8
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.6e-54 217.2 638 31.7
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 8.0e-54 216.1 634 30.8
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.3e-53 214.5 629 32.6
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.0e-52 211.5 654 31.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 5.7e-52 209.9 668 29.2
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.8e-50 204.9 811 27.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 4.1e-50 203.8 650 29.7
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.0e-49 201.4 611 30.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 8.5e-48 196.1 612 28.8
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 4.7e-46 190.3 618 30.1
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 8.0e-46 189.5 530 33.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.2e-45 186.8 626 28.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-44 184.9 628 28.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.0e-44 184.9 628 28.2
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.0e-44 184.9 643 28.0
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.7e-43 180.6 567 31.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.4e-42 178.7 637 27.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.2e-41 175.6 631 29.6
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.6e-41 175.3 612 29.4
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.6e-41 175.3 669 28.8
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.6e-41 175.3 618 28.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.0e-41 174.9 626 29.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 7.7e-41 172.9 667 27.4
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 7.7e-41 172.9 692 29.8
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.9e-40 171.0 629 29.7
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.0e-40 170.2 718 28.6
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 4.2e-39 167.2 644 27.6
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.1e-38 163.3 630 27.5
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.1e-38 163.3 632 27.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.3e-37 161.4 401 32.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-37 161.4 634 27.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 4.0e-37 160.6 596 28.4
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 6.8e-37 159.8 370 32.4
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 6.8e-37 159.8 648 26.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 5.7e-36 156.8 242 42.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.2e-35 154.8 624 25.6
PGSC0003DMG402013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.2e-35 154.8 85 92.9
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.8e-35 154.5 350 33.7
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.7e-35 154.1 655 26.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 4.9e-35 153.7 664 26.8
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.1e-34 151.0 124 59.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.6e-33 148.7 660 26.5
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 4.5e-33 147.1 186 43.0
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.0e-32 146.0 468 26.5
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.9e-32 144.4 632 26.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 8.6e-32 142.9 626 26.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.6e-32 142.9 124 57.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.6e-32 142.9 124 57.3
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.5e-31 142.1 605 25.8
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-31 141.7 633 27.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 4.2e-31 140.6 160 47.5
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 7.2e-31 139.8 633 27.6
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.6e-30 138.7 618 26.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 5.2e-29 133.7 665 26.5
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.0e-28 131.7 702 24.4
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 5.7e-28 130.2 611 25.7
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 9.8e-28 129.4 616 26.1
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.3e-27 129.0 473 27.7
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.2e-27 128.3 363 29.2
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.7e-27 127.5 696 23.9
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 6.3e-27 126.7 612 26.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 8.3e-27 126.3 132 50.0
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.2e-26 124.4 611 26.0
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 5.4e-26 123.6 627 28.7
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.2e-25 122.5 199 39.2
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.6e-25 122.1 330 31.2
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 7.8e-25 119.8 612 24.7
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 5.0e-24 117.1 131 49.6
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 8.6e-24 116.3 122 49.2
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 8.6e-24 116.3 126 48.4
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.5e-23 115.5 124 50.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.9e-23 115.2 417 28.8
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.3e-23 114.0 317 30.9
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.3e-23 114.0 403 29.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 7.3e-23 113.2 636 24.1
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 7.3e-23 113.2 539 26.2
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.6e-22 112.1 505 25.1
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 6.1e-22 110.2 371 28.0
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.0e-21 109.4 203 36.5
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.8e-21 108.6 607 27.8
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 4.0e-21 107.5 303 31.0
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 6.8e-21 106.7 741 21.9
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 2.0e-20 105.1 558 24.0
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 7.5e-20 103.2 646 24.5
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.3e-19 102.4 476 26.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 4.6e-17 94.0 347 28.0
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.2e-14 85.9 134 36.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.3e-13 81.6 227 28.2
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 5.2e-13 80.5 114 37.7
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.6e-12 78.2 168 27.4
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 3.4e-12 77.8 395 25.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 4.9e-11 73.9 149 28.9
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 8.3e-11 73.2 134 32.8
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.2e-10 71.2 54 61.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.1e-10 70.9 93 37.6
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.1e-10 70.9 93 37.6
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 3.5e-09 67.8 77 48.1
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.5e-07 61.6 77 36.4
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 9.5e-07 59.7 54 51.9


User provided reference genes

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