Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g032780.1 Solanum lycopersicum HOM05D000257 ORTHO05D009129 8.7e-23 109.4 53 100.0
Solyc06g063270.4 Solanum lycopersicum HOM05D000257 ORTHO05D009129 3.0e-15 84.3 50 78.0
Sopen06g022720 Solanum pennellii HOM05D000257 ORTHO05D009129 3.0e-15 84.3 50 78.0
PGSC0003DMG400026504 Solanum tuberosum HOM05D000257 ORTHO05D009129 3.0e-15 84.3 50 78.0
Nitab4.5_0001332g0030 Nicotiana tabacum HOM05D000257 ORTHO05D009129 4.3e-14 80.5 50 74.0
Nitab4.5_0004670g0010 Nicotiana tabacum HOM05D000257 ORTHO05D009129 4.3e-14 80.5 50 74.0
Peaxi162Scf00184g00054 Petunia axillaris HOM05D000257 ORTHO05D009129 7.4e-14 79.7 50 72.0
ClCG01G005540 Citrullus lanatus HOM05D000257 ORTHO05D009129 2.1e-13 78.2 50 68.0
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 2.8e-13 77.8 50 64.0
QL09p014688 Quercus lobata HOM05D000257 ORTHO05D009129 4.8e-13 77.0 50 66.0
Actinidia32877 Actinidia chinensis HOM05D000257 ORTHO05D009129 6.2e-13 76.6 50 64.0
CAN.G308.8 Capsicum annuum HOM05D000257 ORTHO05D009129 6.2e-13 76.6 50 68.0
QL02p103682 Quercus lobata HOM05D000257 ORTHO05D009129 8.1e-13 76.3 50 66.0
Sed0026313 Sechium edule HOM05D000257 ORTHO05D009129 8.1e-13 76.3 50 68.0
CiPaw.04G066200 Carya illinoinensis HOM05D000257 ORTHO05D009129 1.1e-12 75.9 50 64.0
Lj8C26G7 Lonicera japonica HOM05D000257 ORTHO05D009129 1.1e-12 75.9 50 62.0
Rhsim03G0178600 Rhododendron simsii HOM05D000257 ORTHO05D009129 1.1e-12 75.9 50 66.0
CSS0015741 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D009129 1.4e-12 75.5 50 66.0
Gohir.1Z049360 Gossypium hirsutum HOM05D000257 ORTHO05D009129 1.4e-12 75.5 50 62.0
Gohir.A08G101601 Gossypium hirsutum HOM05D000257 ORTHO05D009129 1.4e-12 75.5 50 62.0
Gorai.004G120600 Gossypium raimondii HOM05D000257 ORTHO05D009129 1.4e-12 75.5 50 62.0
MELO3C005376.2 Cucumis melo HOM05D000257 ORTHO05D009129 1.8e-12 75.1 51 62.7
Prupe.2G291500 Prunus persica HOM05D000257 ORTHO05D009129 1.8e-12 75.1 50 64.0
CsaV3_5G005780 Cucumis sativus L. HOM05D000257 ORTHO05D009129 2.4e-12 74.7 50 64.0
unitig_8.g3929 Utricularia gibba HOM05D000257 ORTHO05D009129 3.1e-12 74.3 50 64.0
MD01G1198200 Malus domestica HOM05D000257 ORTHO05D009129 4.0e-12 73.9 50 64.0
MD07G1266100 Malus domestica HOM05D000257 ORTHO05D009129 4.0e-12 73.9 50 64.0
VMungo0464G0115 Vigna mungo HOM05D000257 ORTHO05D009129 4.0e-12 73.9 50 66.0
Duzib205G1462 Durio zibethinus HOM05D000257 ORTHO05D009129 5.3e-12 73.6 50 60.0
Gohir.D08G112200 Gossypium hirsutum HOM05D000257 ORTHO05D009129 5.3e-12 73.6 50 60.0
EL10Ac3g05717 Beta vulgaris HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 62.0
AUR62021219 Chenopodium quinoa HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 62.0
Nn6g34215 Nelumbo nucifera HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 66.0
Potri.015G141700 Populus trichocarpa HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 64.0
RcHm_v2.0_Chr5g0033651 Rosa chinensis HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 64.0
Sc19g0001610 Simmondsia chinensis HOM05D000257 ORTHO05D009129 6.9e-12 73.2 48 62.5
SGA_v2.0_scaffold2G01072 Striga asiatica HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 62.0
vmacro06704 Vaccinium macrocarpon HOM05D000257 ORTHO05D009129 6.9e-12 73.2 50 62.0
FvH4_3g19980 Fragaria vesca HOM05D000257 ORTHO05D009129 9.0e-12 72.8 50 64.0
FAN11G2138 Fragaria x ananassa HOM05D000257 ORTHO05D009129 9.0e-12 72.8 50 64.0
Hund28403 Selenicereus undatus HOM05D000257 ORTHO05D009129 9.0e-12 72.8 50 62.0
Hund28406 Selenicereus undatus HOM05D000257 ORTHO05D009129 9.0e-12 72.8 50 62.0
CANSAT78G2275 Cannabis sativa HOM05D000257 ORTHO05D009129 1.2e-11 72.4 48 64.6
Cpa.g.sc37.23 Carica papaya HOM05D000257 ORTHO05D009129 1.2e-11 72.4 50 60.0
DCAR_014593 Daucus carota HOM05D000257 ORTHO05D009129 1.2e-11 72.4 47 70.2
Sabra15G0152000 Salix brachista HOM05D000257 ORTHO05D009129 1.5e-11 72.0 50 64.0
SalBow4G2391 Salvia bowleyana HOM05D000257 ORTHO05D009129 1.5e-11 72.0 50 60.0
Aqoxy5G03965 Aquilegia oxysepala HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 58.0
AL7G18050 Arabidopsis lyrata HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 58.0
MSTRG.8753 Avicennia marina HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 60.0
Carub.0007s0697 Capsella rubella HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 58.0
AUR62016012 Chenopodium quinoa HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 60.0
Eucgr.K00235 Eucalyptus grandis HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 62.0
Manes.04G009250 Manihot esculenta HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 62.0
Oeu021774.1 Olea europaea HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 60.0
Thecc.03G172600 Theobroma cacao HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 60.0
TAR636G0724 Trochodendron aralioides HOM05D000257 ORTHO05D009129 2.0e-11 71.6 50 62.0
Cfa008295 Carpinus fangiana HOM05D000257 ORTHO05D009129 2.6e-11 71.2 50 62.0
Haze_13739 Corylus avellana HOM05D000257 ORTHO05D009129 2.6e-11 71.2 50 62.0
Thhalv10025335m.g Eutrema salsugineum HOM05D000257 ORTHO05D009129 2.6e-11 71.2 50 56.0
Glyma.16G196600 Glycine max HOM05D000257 ORTHO05D009129 3.4e-11 70.9 50 64.0
TWI39G1076 Tripterygium wilfordii HOM05D000257 ORTHO05D009129 3.4e-11 70.9 50 60.0
AT4G33495 Arabidopsis thaliana HOM05D000257 ORTHO05D009129 4.5e-11 70.5 50 58.0
CARHR241580 Cardamine hirsuta HOM05D000257 ORTHO05D009129 4.5e-11 70.5 50 56.0
CDE11G0322 Ceratophyllum demersum HOM05D000257 ORTHO05D009129 4.5e-11 70.5 50 60.0
Sp7g31230 Schrenkiella parvula HOM05D000257 ORTHO05D009129 4.5e-11 70.5 50 56.0
Ca_27174_v3 Cicer arietinum L. HOM05D000257 ORTHO05D009129 5.8e-11 70.1 48 64.6
Migut.F00361 Erythranthe guttata HOM05D000257 ORTHO05D009129 5.8e-11 70.1 50 60.0
PSO782G0298 Papaver somniferum HOM05D000257 ORTHO05D009129 5.8e-11 70.1 50 60.0
Atru.chr1.491 Acer truncatum HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 62.0
BolC1t00498H Brassica oleracea HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 56.0
FAN16G3560 Fragaria x ananassa HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 62.0
FAN21G3346 Fragaria x ananassa HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 62.0
FAN25G3122 Fragaria x ananassa HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 62.0
Phvul.004G119900 Phaseolus vulgaris HOM05D000257 ORTHO05D009129 7.6e-11 69.7 50 62.0
C01p05180 Brassica napus HOM05D000257 ORTHO05D009129 9.9e-11 69.3 50 56.0
BraA01t00460Z Brassica rapa HOM05D000257 ORTHO05D009129 1.7e-10 68.6 50 54.0
PSO478G3976 Papaver somniferum HOM05D000257 ORTHO05D009129 1.7e-10 68.6 50 58.0
SHI13799 Sapria himalayana HOM05D000257 ORTHO05D009129 1.7e-10 68.6 47 63.8
A01p04770 Brassica napus HOM05D000257 ORTHO05D009129 2.2e-10 68.2 50 54.0
Lsat_1_v5_gn_9_54260 Lactuca sativa HOM05D000257 ORTHO05D009129 2.2e-10 68.2 50 54.0
Manes.14G028000 Manihot esculenta HOM05D000257 ORTHO05D009129 2.2e-10 68.2 50 60.0
Medtr6g033595 Medicago truncatula HOM05D000257 ORTHO05D009129 2.2e-10 68.2 48 62.5
Phvul.001G010000 Phaseolus vulgaris HOM05D000257 ORTHO05D009129 2.2e-10 68.2 50 60.0
Aa31sc494G30 Aethionema arabicum HOM05D000257 ORTHO05D009129 2.9e-10 67.8 49 57.1
BcaC09g52166 Brassica carinata HOM05D000257 ORTHO05D009129 2.9e-10 67.8 49 57.1
Ah.07g207370 Amaranthus hybridus HOM05D000257 ORTHO05D009129 3.8e-10 67.4 50 54.0
Lalb_Chr01g0009191 Lupinus albus HOM05D000257 ORTHO05D009129 4.9e-10 67.0 48 62.5
Psat6g206560 Pisum sativum HOM05D000257 ORTHO05D009129 4.9e-10 67.0 48 62.5
ECA232G1017 Erigeron canadensis HOM05D001933 ORTHO05D009129 6.4e-10 66.6 50 54.0
PGR102G1569 Punica granatum HOM05D000257 ORTHO05D009129 8.4e-10 66.2 50 54.0
ATR0757G066 Amborella trichopoda HOM05D000257 ORTHO05D009129 1.1e-09 65.9 48 54.2
Lsat_1_v5_gn_9_54160 Lactuca sativa HOM05D000257 ORTHO05D009129 1.9e-09 65.1 50 52.0
HanXRQChr09g0274811 Helianthus annuus HOM05D000257 ORTHO05D009129 2.4e-09 64.7 48 56.2
Lj2g0021516 Lotus japonicus HOM05D000257 ORTHO05D009129 4.2e-09 63.9 51 60.8
Medtr2g067960 Medicago truncatula HOM05D000257 ORTHO05D009129 1.2e-08 62.4 48 58.3
TPR.G10745 Trifolium pratense HOM05D000257 ORTHO05D009129 1.6e-08 62.0 44 61.4
Ciclev10004876m.g Citrus clementina HOM05D000257 ORTHO05D009129 2.7e-08 61.2 49 57.1
MBI04_g33645_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009129 7.9e-08 59.7 48 54.2


User provided reference genes

Program Settings