Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g032430.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.1e-46 189.5 92 100.0
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 5.9e-19 97.4 122 50.0
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.0e-18 96.7 122 49.2
SalBow1G1175 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.0e-18 96.7 122 50.0
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.2e-18 95.5 122 49.2
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 48.4
FAN01G2373 Fragaria x ananassa HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 48.4
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 49.2
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 48.4
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 49.2
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 49.2
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.9e-18 95.1 122 49.2
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 3.8e-18 94.7 122 49.2
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 5.0e-18 94.4 122 48.4
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 5.0e-18 94.4 123 48.0
RhsimPtG0005000 Rhododendron simsii HOM05D000533 ORTHO05D001069 5.0e-18 94.4 122 46.7
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 5.0e-18 94.4 122 46.7
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 5.0e-18 94.4 122 46.7
PGSC0003DMG401008783 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.0e-18 94.4 122 48.4
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 6.5e-18 94.0 122 47.5
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 8.5e-18 93.6 123 48.8
Lsat_1_v5_gn_9_49240 Lactuca sativa HOM05D000533 ORTHO05D001069 8.5e-18 93.6 123 48.8
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.1e-17 93.2 122 47.5
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.1e-17 93.2 122 47.5
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 1.1e-17 93.2 122 48.4
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 1.1e-17 93.2 120 47.5
AL9U11960 Arabidopsis lyrata HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BolSC44t60826H Brassica oleracea HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BolSC45t60905H Brassica oleracea HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BraSC59t46530Z Brassica rapa HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 46.7
Eucgr.K01620 Eucalyptus grandis HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 47.5
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 1.5e-17 92.8 122 47.5
BolSC29t60550H Brassica oleracea HOM05D000533 ORTHO05D001069 1.9e-17 92.4 127 45.7
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 1.9e-17 92.4 122 47.5
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 1.9e-17 92.4 122 46.7
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 47.5
EL10Ac1g02290 Beta vulgaris HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 46.7
EL10Ac6g14289 Beta vulgaris HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 46.7
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 3.2e-17 91.7 122 48.4
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 4.2e-17 91.3 122 46.7
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 4.2e-17 91.3 122 46.7
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 4.2e-17 91.3 122 46.7
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 4.2e-17 91.3 122 46.7
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 5.5e-17 90.9 122 46.7
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 5.5e-17 90.9 122 46.7
Psat3g095040 Pisum sativum HOM05D000533 ORTHO05D001069 5.5e-17 90.9 122 46.7
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 5.5e-17 90.9 122 46.7
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 7.2e-17 90.5 122 46.7
C02p28810 Brassica napus HOM05D000533 ORTHO05D001069 1.2e-16 89.7 137 44.5
AUR62028573 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.6e-16 89.4 122 45.9
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.6e-16 89.4 95 56.8
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 2.8e-16 88.6 122 45.1
HanXRQChr09g0251511 Helianthus annuus HOM05D000533 ORTHO05D001069 4.7e-16 87.8 122 46.7
Psat0s1920g0160 Pisum sativum HOM05D000533 ORTHO05D001069 1.8e-15 85.9 121 45.5
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.0e-15 84.7 122 45.1
SEGI_41539 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.0e-15 84.7 122 45.1
AUR62043262 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.8e-15 84.0 122 43.4
Nitab4.5_0007400g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-14 82.4 124 45.2
Aa31LG5G21730 Aethionema arabicum HOM05D000533 ORTHO05D001069 7.5e-14 80.5 72 62.5
Mapoly0048s0043 Marchantia polymorpha HOM05D000533 ORTHO05D001069 3.5e-11 71.6 122 40.2
Lalb_Chr18g0049411 Lupinus albus HOM05D000533 ORTHO05D001069 4.5e-11 71.2 74 55.4
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 7.8e-11 70.5 107 43.0
Migut.D01248 Erythranthe guttata HOM05D000533 ORTHO05D001069 2.3e-10 68.9 110 40.9
GSVIVG01012613001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.3e-10 68.9 79 55.7
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 5.0e-10 67.8 122 38.5
Gohir.D04G096580 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.3e-09 64.7 58 53.4
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 7.3e-09 63.9 38 81.6
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 7.3e-09 63.9 38 81.6
Lj2C1238G35 Lonicera japonica HOM05D000533 ORTHO05D001069 9.5e-09 63.5 58 55.2
Sed0015694 Sechium edule HOM05D000533 ORTHO05D001069 9.5e-09 63.5 58 55.2
Sed0022513 Sechium edule HOM05D000533 ORTHO05D001069 9.5e-09 63.5 89 42.7
Solyc00g500280.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.5e-09 63.5 58 55.2
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.2e-08 63.2 58 53.4
Nn1g08632 Nelumbo nucifera HOM05D000533 ORTHO05D001069 2.1e-08 62.4 53 58.5
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 2.1e-08 62.4 37 70.3
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 2.8e-08 62.0 76 52.6
Psat0s1160g0400 Pisum sativum HOM05D000533 ORTHO05D002807 2.8e-08 62.0 47 66.0
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 3.6e-08 61.6 37 81.1
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 3.6e-08 61.6 37 81.1
Nitab4.5_0000660g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.6e-08 61.6 37 78.4
Psat0s1160g0320 Pisum sativum HOM05D000533 ORTHO05D001069 3.6e-08 61.6 55 56.4
Nitab4.5_0000660g0060 Nicotiana tabacum HOM05D000533 ORTHO05D002807 6.1e-08 60.8 27 92.6
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
Nn1g08631 Nelumbo nucifera HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
Peaxi162Scf01018g00211 Petunia axillaris HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.0e-07 60.1 37 78.4
CAN.G1045.9 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-07 59.7 57 50.9
HanXRQChr00c0504g0575321 Helianthus annuus HOM05D000533 ORTHO05D001069 1.4e-07 59.7 36 80.6
EL10Ac9g21011 Beta vulgaris HOM05D000533 ORTHO05D001069 1.8e-07 59.3 49 59.2
MELO3C027054.2 Cucumis melo HOM05D000533 ORTHO05D001069 1.8e-07 59.3 37 73.0
Nitab4.5_0006502g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-07 59.3 37 78.4
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 2.3e-07 58.9 37 73.0
BolC2t10601H Brassica oleracea HOM05D000533 ORTHO05D001069 2.3e-07 58.9 37 73.0
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 2.3e-07 58.9 37 73.0
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 2.3e-07 58.9 37 73.0
Psat5g037800 Pisum sativum HOM05D000533 ORTHO05D001069 3.0e-07 58.5 33 84.8
Solyc10g047400.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.0e-07 58.5 33 81.8
arahy.Tifrunner.gnm1.ann1.G8ZYC2 Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-07 58.2 37 75.7
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 4.0e-07 58.2 37 75.7
arahy.Tifrunner.gnm1.ann1.V68ACY Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-07 58.2 37 75.7
Solyc07g032420.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.0e-07 58.2 58 48.3
Psat7g126800 Pisum sativum HOM05D000533 ORTHO05D001069 5.2e-07 57.8 33 84.8
Gorai.004G123700 Gossypium raimondii HOM05D000533 ORTHO05D001069 6.8e-07 57.4 63 42.9
Nitab4.5_0006409g0060 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.9e-07 57.0 37 73.0
Nitab4.5_0000003g0640 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.5e-06 56.2 37 73.0
BolSC49t61147H Brassica oleracea HOM05D000533 ORTHO05D001069 2.0e-06 55.8 31 83.9
Haze_22013 Corylus avellana HOM05D000001 ORTHO05D000003 2.6e-06 55.5 37 73.0
Gohir.D08G108108 Gossypium hirsutum HOM05D000533 ORTHO05D001069 2.6e-06 55.5 66 40.9
A08p24980 Brassica napus HOM05D000533 ORTHO05D001069 3.4e-06 55.1 45 64.4
BraA08t34453Z Brassica rapa HOM05D000533 ORTHO05D001069 3.4e-06 55.1 45 64.4
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 5.7e-06 54.3 37 73.0
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 5.7e-06 54.3 31 87.1
Lsat_1_v5_gn_5_65981 Lactuca sativa HOM05D000533 ORTHO05D001069 5.7e-06 54.3 101 40.6
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.5e-06 53.9 103 40.8


User provided reference genes

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