Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.5e-78 296.2 156 100.0
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 1.1e-62 243.4 137 94.9
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 1.1e-62 243.4 137 94.9
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.1e-62 243.4 137 94.9
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 4.0e-60 235.0 137 92.0
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 1.2e-59 233.4 137 88.3
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.8e-59 231.1 137 91.2
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.9e-57 226.1 143 82.5
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-56 223.0 136 85.3
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 3.5e-56 221.9 136 86.0
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 3.5e-56 221.9 136 86.0
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 3.5e-56 221.9 136 86.0
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 1.0e-55 220.3 137 84.7
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.0e-55 220.3 137 84.7
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 1.0e-55 220.3 137 83.9
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.8e-55 219.5 137 87.6
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.9e-55 218.4 137 83.2
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.9e-55 218.4 137 83.2
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.9e-55 218.4 137 83.2
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 2.5e-54 215.7 144 79.9
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 3.3e-54 215.3 137 83.2
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 3.3e-54 215.3 137 83.2
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-54 214.9 136 82.4
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 5.6e-54 214.5 137 85.4
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 7.4e-54 214.2 137 82.5
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 7.4e-54 214.2 137 82.5
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 9.6e-54 213.8 137 81.8
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 1.6e-53 213.0 137 81.8
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 5.3e-52 208.0 137 80.3
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 1.2e-51 206.8 142 77.5
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.5e-51 206.5 137 79.6
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 1.5e-51 206.5 137 79.6
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 3.4e-51 205.3 136 78.7
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 5.8e-51 204.5 137 78.8
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 7.6e-51 204.1 125 89.6
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 9.9e-51 203.8 137 77.4
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 3.8e-50 201.8 142 76.8
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 6.4e-50 201.1 137 75.2
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 1.4e-49 199.9 137 75.2
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 2.4e-49 199.1 136 75.7
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-47 193.4 137 73.7
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.1e-47 191.4 128 78.9
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 1.3e-45 186.8 129 78.3
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.6e-40 169.9 137 69.3
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 8.7e-39 164.1 103 86.4
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 2.8e-37 159.1 108 77.8
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 3.4e-35 152.1 104 75.0
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.0e-31 139.0 98 75.5
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 5.1e-31 138.3 129 60.5
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 6.7e-31 137.9 92 78.3
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 2.5e-30 136.0 93 71.0
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 3.3e-30 135.6 91 78.0
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 3.3e-30 135.6 91 78.0
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 3.3e-30 135.6 91 78.0
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 3.3e-30 135.6 91 78.0
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 9.7e-30 134.0 81 77.8
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 9.7e-30 134.0 81 77.8
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.3e-29 133.7 80 91.2
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 3.7e-29 132.1 75 81.3
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 3.1e-28 129.0 75 80.0
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 2.6e-27 125.9 91 69.2
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 7.7e-27 124.4 144 56.2
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 1.7e-26 123.2 75 76.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-25 119.8 83 77.1
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-24 117.1 93 64.5
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 4.7e-24 115.2 75 72.0
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 4.7e-24 115.2 75 72.0
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 6.1e-24 114.8 131 50.4
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 2.3e-23 112.8 78 69.2
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 5.1e-23 111.7 75 70.7
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 6.7e-23 111.3 80 76.2
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.0e-22 109.8 74 85.1
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 7.4e-22 107.8 72 72.2
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-21 105.5 93 65.6
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 7.0e-20 101.3 68 82.4
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 3.8e-18 95.5 137 51.1
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 9.4e-17 90.9 58 89.7
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.9e-15 85.5 52 78.8
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-14 82.8 65 75.4
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 9.7e-14 80.9 85 62.4
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 5.3e-12 75.1 73 67.1
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 1.2e-11 73.9 45 82.2
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 4.5e-11 72.0 107 48.6
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 1.7e-10 70.1 52 69.2
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.7e-10 70.1 52 69.2
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.7e-10 70.1 52 69.2
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 1.1e-09 67.4 42 78.6
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 7.2e-09 64.7 49 73.5
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 8.0e-08 61.2 70 52.9
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 1.0e-07 60.8 42 73.8
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 1.8e-07 60.1 44 77.3
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-07 59.7 40 75.0
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 9.7e-06 54.3 80 35.0


User provided reference genes

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