Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g026873.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.8e-78 295.8 148 100.0
Sopen04g009500 Solanum pennellii HOM05D022806 ORTHO05D030645 1.0e-33 147.1 83 88.0
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 8.9e-33 144.1 73 97.3
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 2.6e-32 142.5 73 94.5
Solyc05g042010.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 4.4e-32 141.7 73 94.5
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.3e-27 124.4 68 88.2
Solyc12g019450.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 4.0e-25 118.6 67 88.1
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.6e-24 115.9 68 88.2
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.5e-21 105.5 68 73.5
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.3e-17 92.8 89 52.8
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-15 86.3 70 58.6
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 4.1e-14 82.0 71 52.1
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 7.1e-14 81.3 70 52.9
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 1.2e-13 80.5 64 51.6
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 2.1e-13 79.7 66 54.5
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 7.8e-13 77.8 71 50.7
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-11 73.2 71 47.9
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 5.6e-11 71.6 71 46.5
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 7.3e-11 71.2 71 46.5
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 6.2e-10 68.2 71 45.1
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 1.8e-09 66.6 71 39.4
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.4e-09 66.2 71 43.7
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 4.0e-09 65.5 47 63.8
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 5.2e-09 65.1 71 46.5
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 6.8e-09 64.7 80 47.5
PGSC0003DMG400037966 Solanum tuberosum HOM05D002954 ORTHO05D003353 8.9e-09 64.3 56 55.4
PGSC0003DMG400016266 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.2e-08 63.9 38 84.2
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.5e-08 63.5 66 47.0
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 3.4e-08 62.4 80 38.8
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 3.4e-08 62.4 79 43.0
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 3.4e-08 62.4 79 43.0
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 4.4e-08 62.0 71 39.4
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 4.4e-08 62.0 79 43.0
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 5.8e-08 61.6 66 39.4
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-08 61.6 66 48.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.7e-07 60.1 66 47.0
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.8e-07 58.9 71 40.8
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.8e-07 58.9 68 48.5
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 4.9e-07 58.5 71 42.3
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 4.9e-07 58.5 78 39.7
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 4.9e-07 58.5 78 39.7
CAN.G11.13 Capsicum annuum HOM05D000262 ORTHO05D000300 1.1e-06 57.4 38 63.2
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 1.4e-06 57.0 47 59.6
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-06 57.0 49 53.1
Nitab4.5_0000668g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.2e-06 55.8 59 49.2
Peaxi162Scf01294g00128 Petunia axillaris HOM05D009128 ORTHO05D011389 3.2e-06 55.8 67 41.8
Nitab4.5_0002983g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-06 55.5 34 73.5
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 5.4e-06 55.1 71 39.4
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 7.1e-06 54.7 64 45.3
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 7.1e-06 54.7 71 39.4


User provided reference genes

Program Settings