Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g025530.1 Solanum lycopersicum HOM05D002941 ORTHO05D007802 3.5e-52 208.0 105 100.0
Sopen07g013800 Solanum pennellii HOM05D002941 ORTHO05D007802 2.8e-41 171.8 90 95.6
PGSC0003DMG400003266 Solanum tuberosum HOM05D002941 ORTHO05D007802 4.1e-32 141.4 96 80.2
CAN.G52.1 Capsicum annuum HOM05D002941 ORTHO05D007802 6.7e-27 124.0 106 63.2
Nitab4.5_0010222g0020 Nicotiana tabacum HOM05D002941 ORTHO05D007802 4.7e-20 101.3 94 59.6
Oeu034044.1 Olea europaea HOM05D002941 ORTHO05D007802 6.5e-14 80.9 96 51.0
Haze_25898 Corylus avellana HOM05D002941 ORTHO05D007802 2.5e-13 79.0 99 45.5
Actinidia39722 Actinidia chinensis HOM05D002941 ORTHO05D007802 3.2e-13 78.6 91 51.6
Dinv42310 Davidia involucrata HOM05D002941 ORTHO05D007802 1.2e-12 76.6 93 49.5
Atru.chr7.1573 Acer truncatum HOM05D002941 ORTHO05D007802 1.6e-12 76.3 96 50.0
Rhsim05G0022400 Rhododendron simsii HOM05D002941 ORTHO05D007802 3.6e-12 75.1 94 46.8
Cc06_g11270 Coffea canephora HOM05D002941 ORTHO05D007802 8.0e-12 73.9 103 45.6
Cfa003102 Carpinus fangiana HOM05D002941 ORTHO05D007802 8.8e-11 70.5 99 41.4
Lsat_1_v5_gn_8_87601 Lactuca sativa HOM05D002941 ORTHO05D007802 4.4e-10 68.2 93 44.1
Hma1.2p1_0798F.1_g219710 Hydrangea macrophylla HOM05D002941 ORTHO05D007802 9.8e-10 67.0 90 45.6
Actinidia25259 Actinidia chinensis HOM05D002941 ORTHO05D007802 1.7e-09 66.2 89 44.9
Manes.03G032700 Manihot esculenta HOM05D002941 ORTHO05D007802 2.8e-09 65.5 89 46.1
Thecc.09G091200 Theobroma cacao HOM05D002941 ORTHO05D007802 2.8e-09 65.5 85 50.6
CSS0046192 Camellia sinensis var. sinensis HOM05D002941 ORTHO05D007802 3.7e-09 65.1 102 45.1
CSS0033517 Camellia sinensis var. sinensis HOM05D002941 ORTHO05D007802 1.8e-08 62.8 102 43.1
MSTRG.19522 Avicennia marina HOM05D002941 ORTHO05D007802 3.1e-08 62.0 92 47.8
CiPaw.04G151200 Carya illinoinensis HOM05D002941 ORTHO05D007802 3.1e-08 62.0 87 40.2
QL02p062882 Quercus lobata HOM05D002941 ORTHO05D007802 4.1e-08 61.6 102 38.2
vmacro17223 Vaccinium macrocarpon HOM05D002941 ORTHO05D007802 5.4e-08 61.2 86 44.2
Potri.006G150500 Populus trichocarpa HOM05D002941 ORTHO05D007802 2.0e-07 59.3 81 43.2
SalBow6G6088 Salvia bowleyana HOM05D002941 ORTHO05D007802 2.7e-07 58.9 94 46.8
TAR626G1518 Trochodendron aralioides HOM05D002941 ORTHO05D007802 1.0e-06 57.0 94 45.7
ClCG11G001810 Citrullus lanatus HOM05D002941 ORTHO05D007802 1.3e-06 56.6 91 38.5
HanXRQChr04g0126271 Helianthus annuus HOM05D002941 ORTHO05D007802 1.7e-06 56.2 90 38.9
GSVIVG01015217001 Vitis vinifera HOM05D002941 ORTHO05D007802 1.7e-06 56.2 95 42.1
Gohir.D06G070400 Gossypium hirsutum HOM05D002941 ORTHO05D007802 2.3e-06 55.8 97 38.1
Sabra06G0119200 Salix brachista HOM05D002941 ORTHO05D007802 2.3e-06 55.8 86 43.0
Sed0001210 Sechium edule HOM05D002941 ORTHO05D007802 2.3e-06 55.8 91 39.6
Ciclev10008994m.g Citrus clementina HOM05D002941 ORTHO05D007802 2.9e-06 55.5 53 52.8
Duzib187G0758 Durio zibethinus HOM05D002941 ORTHO05D007802 3.8e-06 55.1 103 36.9
MD15G1205400 Malus domestica HOM05D002941 ORTHO05D007802 3.8e-06 55.1 95 40.0
Gohir.A06G071900 Gossypium hirsutum HOM05D002941 ORTHO05D007802 5.0e-06 54.7 88 39.8
Sc14g0000760 Simmondsia chinensis HOM05D002941 ORTHO05D007802 5.0e-06 54.7 71 43.7
CsaV3_2G001520 Cucumis sativus L. HOM05D002941 ORTHO05D007802 8.6e-06 53.9 71 42.3
Gorai.010G082100 Gossypium raimondii HOM05D002941 ORTHO05D007802 8.6e-06 53.9 88 39.8


User provided reference genes

Program Settings