Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-80 303.5 173 100.0
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-32 141.7 111 79.3
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-31 138.3 205 50.2
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-30 136.0 164 48.8
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 6.3e-30 134.8 85 76.5
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-29 134.0 135 55.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-29 132.5 122 54.9
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-29 131.7 106 76.4
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-27 126.3 106 76.4
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.2e-26 121.3 129 53.5
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-25 119.8 161 44.7
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-25 118.2 106 73.6
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 8.0e-25 117.9 105 74.3
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-24 116.3 112 71.4
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 9.7e-23 110.9 106 70.8
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 8.2e-22 107.8 106 57.5
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-21 107.5 98 73.5
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-21 107.5 111 67.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-21 107.1 106 62.3
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 1.8e-21 106.7 111 49.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-21 106.7 116 50.9
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-21 105.5 98 60.2
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 9.1e-21 104.4 114 51.8
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.1e-21 104.4 98 73.5
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-20 104.0 117 54.7
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-20 104.0 112 64.3
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-20 103.6 98 57.1
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-20 103.6 98 58.2
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-20 102.4 105 49.5
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 5.9e-20 101.7 111 59.5
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-20 101.7 107 61.7
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-19 100.9 153 41.2
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-19 100.9 99 73.7
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-19 99.4 93 74.2
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 5.0e-19 98.6 164 39.0
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-18 97.1 73 67.1
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-18 96.7 111 57.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 5.5e-18 95.1 116 44.0
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-17 94.0 74 66.2
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-17 92.8 96 55.2
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-17 92.4 106 50.0
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-16 90.9 106 64.2
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-15 87.4 90 71.1
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-15 86.7 111 58.6
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.4e-15 85.9 95 51.6
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-14 84.0 124 38.7
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.3e-14 81.3 63 63.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-13 79.7 59 67.8
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-13 79.0 164 45.1
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.6e-12 77.0 114 40.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-12 76.6 64 51.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-12 75.9 68 48.5
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-12 75.5 55 63.6
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-12 75.5 67 49.3
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-12 75.1 75 74.7
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.7e-12 74.7 147 30.6
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-11 73.2 69 46.4
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.9e-11 72.8 104 40.4
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-11 72.8 62 50.0
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-11 72.4 68 48.5
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-11 72.0 64 46.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-10 70.1 117 32.5
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-10 69.7 83 39.8
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-10 69.3 50 66.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-10 69.3 65 49.2
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-10 68.9 64 50.0
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-10 67.8 61 45.9
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-09 67.4 69 46.4
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.6e-09 67.0 64 48.4
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-09 67.0 54 55.6
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-09 65.5 76 40.8
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.0e-08 64.3 37 81.1
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-08 64.3 61 44.3
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-08 63.5 66 45.5
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-08 63.2 98 35.7
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 3.0e-08 62.8 134 32.8
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.0e-08 62.4 83 48.2
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 6.8e-08 61.6 126 32.5
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.5e-07 60.5 134 32.1
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.5e-07 60.5 133 32.3
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-07 60.5 51 51.0
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-07 60.5 51 51.0
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.0e-07 60.1 141 29.8
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-07 59.3 31 90.3
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 9.8e-07 57.8 62 45.2
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.7e-06 57.0 31 87.1
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 4.9e-06 55.5 49 51.0
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.3e-06 54.7 67 37.3


User provided reference genes

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