Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g020850.1 Solanum lycopersicum HOM05D000214 ORTHO05D000131 8.3e-24 112.8 56 100.0
BcaB01g01131 Brassica carinata HOM05D000214 ORTHO05D000131 2.5e-12 74.7 55 65.5
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 1.2e-11 72.4 55 60.0
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 2.1e-11 71.6 55 61.8
BcaC05g27221 Brassica carinata HOM05D000214 ORTHO05D000131 2.1e-11 71.6 55 63.6
BcaB02g11144 Brassica carinata HOM05D000214 ORTHO05D000131 2.8e-11 71.2 55 61.8
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.8e-11 71.2 55 63.6
BcaB03g15418 Brassica carinata HOM05D000214 ORTHO05D000131 4.7e-11 70.5 55 63.6
BcaB06g28793 Brassica carinata HOM05D000214 ORTHO05D000131 6.2e-11 70.1 55 63.6
AT2G13770 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 8.0e-11 69.7 55 60.0
BcaC01g03564 Brassica carinata HOM05D000214 ORTHO05D000131 8.0e-11 69.7 55 61.8
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 8.0e-11 69.7 55 60.0
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 8.0e-11 69.7 55 60.0
Atru.chr5.1925 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-10 68.9 55 61.8
Atru.chr12.1926 Acer truncatum HOM05D000214 ORTHO05D000131 2.3e-10 68.2 55 60.0
Atru.chr12.1934 Acer truncatum HOM05D000214 ORTHO05D000131 2.3e-10 68.2 55 60.0
BcaC08g46594 Brassica carinata HOM05D000214 ORTHO05D000131 2.3e-10 68.2 55 58.2
Atru.chr10.1039 Acer truncatum HOM05D000214 ORTHO05D000131 3.1e-10 67.8 55 58.2
Atru.chr9.957 Acer truncatum HOM05D000214 ORTHO05D000131 3.1e-10 67.8 52 59.6
CARHR180780 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.1e-10 67.8 47 59.6
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 5.2e-10 67.0 55 58.2
Atru.chr8.364 Acer truncatum HOM05D000214 ORTHO05D000131 5.2e-10 67.0 55 58.2
CANSAT78G2396 Cannabis sativa HOM05D000214 ORTHO05D000131 6.8e-10 66.6 55 58.2
Atru.chr7.13 Acer truncatum HOM05D000214 ORTHO05D000131 8.9e-10 66.2 55 56.4
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 8.9e-10 66.2 55 54.5
CARHR111840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.2e-09 65.9 55 58.2
CARHR182520 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.0e-09 65.1 55 54.5
TWI34G1953 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.0e-09 65.1 55 56.4
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 2.6e-09 64.7 55 56.4
TWI12G0457 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.6e-09 64.7 55 56.4
TWI23G0405 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.6e-09 64.7 55 56.4
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 3.4e-09 64.3 55 58.2
RcHm_v2.0_Chr4g0404131 Rosa chinensis HOM05D000214 ORTHO05D000131 4.4e-09 63.9 55 52.7
TWI32G0342 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 9.8e-09 62.8 55 52.7
TWI38G1241 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 9.8e-09 62.8 55 52.7
TWI53G0029 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.7e-08 62.0 55 52.7
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 50.9
Lj1g0010084 Lotus japonicus HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 50.9
Lj2g0010710 Lotus japonicus HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 50.9
SHI01777 Sapria himalayana HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 50.9
TWI73G0294 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 54.5
TWI74G1528 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.2e-08 61.6 55 49.1
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 2.9e-08 61.2 55 50.9
TWI31G1070 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.7e-08 60.8 55 50.9
Rhsim13G0218800 Rhododendron simsii HOM05D000214 ORTHO05D000131 6.4e-08 60.1 55 52.7
TWI36G1152 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.3e-08 59.7 55 47.3
TWI75G0296 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.3e-08 59.7 55 47.3
BcaB06g26267 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-07 59.3 54 51.9
Cc09_g09240 Coffea canephora HOM05D000214 ORTHO05D000131 1.1e-07 59.3 55 52.7
Lj1g0024846 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 55 47.3
TWI79G0148 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.1e-07 59.3 55 49.1
Lj1g0017353 Lotus japonicus HOM05D000214 ORTHO05D000131 1.4e-07 58.9 55 52.7
TPR.G40762 Trifolium pratense HOM05D000214 ORTHO05D000131 1.4e-07 58.9 55 52.7
FvH4_1g21002 Fragaria vesca HOM05D000214 ORTHO05D000131 1.9e-07 58.5 55 47.3
FvH4_5g29682 Fragaria vesca HOM05D000214 ORTHO05D000131 1.9e-07 58.5 51 51.0
Lj5g0015099 Lotus japonicus HOM05D000214 ORTHO05D000131 1.9e-07 58.5 55 47.3
Atru.chr10.190 Acer truncatum HOM05D000214 ORTHO05D000131 3.2e-07 57.8 55 52.7
SHI07031 Sapria himalayana HOM05D000214 ORTHO05D000131 3.2e-07 57.8 55 47.3
TWI31G0167 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-07 57.8 55 54.5
TWI39G1198 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-07 57.8 55 54.5
Lj2g0017664 Lotus japonicus HOM05D000214 ORTHO05D000131 4.1e-07 57.4 51 52.9
Hund07344 Selenicereus undatus HOM05D000214 ORTHO05D000131 4.1e-07 57.4 55 50.9
TWI79G1318 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.1e-07 57.4 55 50.9
Lj3g0001624 Lotus japonicus HOM05D000214 ORTHO05D000131 5.4e-07 57.0 47 53.2
TWI32G1100 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.4e-07 57.0 55 47.3
TWI53G0801 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.4e-07 57.0 55 50.9
SHI01657 Sapria himalayana HOM05D000214 ORTHO05D000131 7.0e-07 56.6 55 49.1
SHI16802 Sapria himalayana HOM05D000214 ORTHO05D000131 7.0e-07 56.6 55 47.3
TWI14G0790 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.0e-07 56.6 55 52.7
TWI79G0227 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.0e-07 56.6 55 52.7
CARHR128850 Cardamine hirsuta HOM05D000214 ORTHO05D000131 9.2e-07 56.2 55 47.3
Ca_07345_v3 Cicer arietinum L. HOM05D000214 ORTHO05D000131 9.2e-07 56.2 55 47.3
Atru.chr4.2600 Acer truncatum HOM05D000214 ORTHO05D000131 1.2e-06 55.8 55 47.3
Thhalv10029366m.g Eutrema salsugineum HOM05D000214 ORTHO05D000131 1.2e-06 55.8 55 49.1
HanXRQChr14g0433871 Helianthus annuus HOM05D000214 ORTHO05D000131 1.2e-06 55.8 55 50.9
Os01g0872900 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 1.2e-06 55.8 55 50.9
Atru.chr3.3389 Acer truncatum HOM05D000214 ORTHO05D000131 1.6e-06 55.5 51 47.1
Lj1g0025486 Lotus japonicus HOM05D000214 ORTHO05D000131 1.6e-06 55.5 52 46.2
Rhsim01G0115100 Rhododendron simsii HOM05D000214 ORTHO05D000131 1.6e-06 55.5 55 43.6
Rhsim09G0030600 Rhododendron simsii HOM05D000214 ORTHO05D000131 1.6e-06 55.5 55 49.1
SGA_v2.0_scaffold14G07050 Striga asiatica HOM05D000214 ORTHO05D000131 1.6e-06 55.5 55 47.3
TWI74G1028 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.6e-06 55.5 55 49.1
CARHR256380 Cardamine hirsuta HOM05D000214 ORTHO05D012798 2.1e-06 55.1 55 45.5
Medtr4g063295 Medicago truncatula HOM05D000214 ORTHO05D000131 2.1e-06 55.1 50 52.0
Hund00684 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.1e-06 55.1 55 47.3
TWI77G0695 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.1e-06 55.1 55 49.1
BolC6t37577H Brassica oleracea HOM05D000214 ORTHO05D000131 2.7e-06 54.7 55 49.1
CARHR060230 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.7e-06 54.7 52 48.1
TPR.G31475 Trifolium pratense HOM05D000214 ORTHO05D000131 2.7e-06 54.7 55 45.5
Atru.chr1.1933 Acer truncatum HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 47.3
Atru.chr1.2140 Acer truncatum HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 47.3
EL10Ac7g17263 Beta vulgaris HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 45.5
SHI07201 Sapria himalayana HOM05D000214 ORTHO05D000131 3.5e-06 54.3 43 48.8
Hund04653 Selenicereus undatus HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 50.9
TWI18G1302 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 45.5
TWI32G1071 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-06 54.3 40 60.0
TWI60G1226 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 45.5
TWI60G1568 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-06 54.3 55 50.9
CARHR029260 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.6e-06 53.9 51 49.0
CARHR058320 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 50.9
PSO063G3103 Papaver somniferum HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 47.3
Hund17532 Selenicereus undatus HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 45.5
TWI15G1159 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 47.3
TWI23G0782 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-06 53.9 50 50.0
TWI73G0992 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 47.3
TWI75G0317 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-06 53.9 55 47.3
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 6.0e-06 53.5 55 47.3
CARHR051850 Cardamine hirsuta HOM05D000214 ORTHO05D000131 6.0e-06 53.5 55 49.1
FvH4_1g21032 Fragaria vesca HOM05D000214 ORTHO05D000131 6.0e-06 53.5 46 45.7
PSO339G6650 Papaver somniferum HOM05D000214 ORTHO05D000131 6.0e-06 53.5 52 46.2
PSO384G1264 Papaver somniferum HOM05D000214 ORTHO05D000131 6.0e-06 53.5 55 47.3
Hund26228 Selenicereus undatus HOM05D000214 ORTHO05D000131 6.0e-06 53.5 55 47.3
SGA_v2.0_scaffold41G15742 Striga asiatica HOM05D000214 ORTHO05D000131 6.0e-06 53.5 55 41.8
Hund02557 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.8e-06 53.1 55 47.3
Hund10036 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.8e-06 53.1 52 50.0
Hund21920 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.8e-06 53.1 55 47.3
Hund28814 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.8e-06 53.1 55 47.3
Hund28816 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.8e-06 53.1 55 47.3
Solyc07g020840.1 Solanum lycopersicum HOM05D000214 ORTHO05D000131 7.8e-06 53.1 37 67.6
TPR.G38081 Trifolium pratense HOM05D000214 ORTHO05D012798 7.8e-06 53.1 55 45.5
TWI12G1376 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.8e-06 53.1 55 49.1


User provided reference genes

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