Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g020840.1 Solanum lycopersicum HOM05D000214 ORTHO05D000131 7.6e-25 116.3 57 100.0
Atru.chr8.364 Acer truncatum HOM05D000214 ORTHO05D000131 2.8e-11 71.2 49 69.4
Atru.chr12.1926 Acer truncatum HOM05D000214 ORTHO05D000131 4.8e-11 70.5 43 76.7
Atru.chr12.1934 Acer truncatum HOM05D000214 ORTHO05D000131 4.8e-11 70.5 43 76.7
Atru.chr10.1039 Acer truncatum HOM05D000214 ORTHO05D000131 8.2e-11 69.7 49 67.3
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 1.1e-10 69.3 49 67.3
BcaB02g11144 Brassica carinata HOM05D000214 ORTHO05D000131 1.8e-10 68.6 49 65.3
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 1.8e-10 68.6 49 65.3
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 2.4e-10 68.2 49 67.3
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.4e-10 68.2 49 67.3
BcaB01g01131 Brassica carinata HOM05D000214 ORTHO05D000131 3.1e-10 67.8 49 65.3
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 4.1e-10 67.4 49 65.3
BcaB03g15418 Brassica carinata HOM05D000214 ORTHO05D000131 4.1e-10 67.4 49 65.3
BcaB06g28793 Brassica carinata HOM05D000214 ORTHO05D000131 4.1e-10 67.4 49 65.3
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 4.1e-10 67.4 49 65.3
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 6.9e-10 66.6 49 65.3
Atru.chr9.957 Acer truncatum HOM05D000214 ORTHO05D000131 1.5e-09 65.5 48 66.7
CANSAT78G2396 Cannabis sativa HOM05D000214 ORTHO05D000131 1.5e-09 65.5 49 63.3
CARHR180780 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.4e-09 64.3 49 59.2
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 5.9e-09 63.5 49 65.3
Atru.chr10.190 Acer truncatum HOM05D000214 ORTHO05D000131 7.7e-09 63.2 48 64.6
AT2G13770 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 1.3e-08 62.4 49 59.2
BcaC01g03564 Brassica carinata HOM05D000214 ORTHO05D000131 1.7e-08 62.0 49 59.2
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 2.2e-08 61.6 47 63.8
BcaC05g27221 Brassica carinata HOM05D000214 ORTHO05D000131 2.9e-08 61.2 49 57.1
TWI74G1028 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.8e-08 60.8 49 57.1
SGA_v2.0_scaffold41G15742 Striga asiatica HOM05D000214 ORTHO05D000131 6.5e-08 60.1 49 59.2
TWI79G1318 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.5e-08 60.1 48 56.2
TWI77G0695 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.5e-08 59.7 47 61.7
Atru.chr1.1933 Acer truncatum HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 61.2
Atru.chr1.2140 Acer truncatum HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 61.2
BcaC08g46594 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 57.1
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 59.2
Lj1g0010084 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 59.2
Lj1g0024846 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 59.2
Lj2g0010710 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 59.2
Lj5g0015099 Lotus japonicus HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 59.2
SHI01777 Sapria himalayana HOM05D000214 ORTHO05D000131 1.1e-07 59.3 49 57.1
CARHR111840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.4e-07 58.9 49 57.1
TWI60G1226 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.4e-07 58.9 49 53.1
Atru.chr4.2600 Acer truncatum HOM05D000214 ORTHO05D000131 1.9e-07 58.5 49 59.2
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 1.9e-07 58.5 49 59.2
Atru.chr12.1070 Acer truncatum HOM05D000214 ORTHO05D000131 2.5e-07 58.2 41 65.9
Lj1g0017353 Lotus japonicus HOM05D000214 ORTHO05D000131 2.5e-07 58.2 49 55.1
Lj2g0017664 Lotus japonicus HOM05D000214 ORTHO05D000131 2.5e-07 58.2 49 59.2
PSO339G6650 Papaver somniferum HOM05D000214 ORTHO05D000131 2.5e-07 58.2 49 55.1
TWI34G1953 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.5e-07 58.2 48 54.2
Atru.chr5.1925 Acer truncatum HOM05D000214 ORTHO05D000131 3.2e-07 57.8 43 65.1
TWI12G0457 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-07 57.8 48 54.2
TWI23G0405 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-07 57.8 48 54.2
Ca_07345_v3 Cicer arietinum L. HOM05D000214 ORTHO05D000131 4.2e-07 57.4 49 57.1
Thhalv10029366m.g Eutrema salsugineum HOM05D000214 ORTHO05D000131 5.5e-07 57.0 47 57.4
HanXRQChr14g0433871 Helianthus annuus HOM05D000214 ORTHO05D000131 5.5e-07 57.0 49 55.1
PSO063G4936 Papaver somniferum HOM05D000214 ORTHO05D000131 5.5e-07 57.0 49 55.1
PSO384G1264 Papaver somniferum HOM05D000214 ORTHO05D000131 5.5e-07 57.0 49 53.1
RcHm_v2.0_Chr4g0404131 Rosa chinensis HOM05D000214 ORTHO05D000131 5.5e-07 57.0 47 59.6
TWI32G1100 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.5e-07 57.0 49 55.1
TWI53G0801 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.5e-07 57.0 48 56.2
CARHR182520 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.2e-07 56.6 49 51.0
PSO541G0425 Papaver somniferum HOM05D000214 ORTHO05D000131 7.2e-07 56.6 49 55.1
TWI32G0342 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.2e-07 56.6 48 54.2
TWI38G1241 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.2e-07 56.6 48 54.2
TPR.G40762 Trifolium pratense HOM05D000214 ORTHO05D000131 9.4e-07 56.2 49 57.1
TWI79G0148 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 9.4e-07 56.2 49 53.1
Lj1g0025486 Lotus japonicus HOM05D000214 ORTHO05D000131 1.2e-06 55.8 49 55.1
SHI06400 Sapria himalayana HOM05D000214 ORTHO05D000131 1.2e-06 55.8 49 53.1
TWI36G1152 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-06 55.8 49 51.0
TWI53G0029 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-06 55.8 48 54.2
TWI75G0296 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-06 55.8 49 51.0
FvH4_1g21002 Fragaria vesca HOM05D000214 ORTHO05D000131 1.6e-06 55.5 49 53.1
PSO339G3000 Papaver somniferum HOM05D000214 ORTHO05D000131 1.6e-06 55.5 49 49.0
PSO675G3933 Papaver somniferum HOM05D000214 ORTHO05D000131 1.6e-06 55.5 49 53.1
BolC6t37577H Brassica oleracea HOM05D000214 ORTHO05D000131 2.1e-06 55.1 47 57.4
PSO017G0410 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO063G2774 Papaver somniferum HOM05D008063 ORTHO05D009799 2.1e-06 55.1 49 53.1
PSO063G7012 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO133G0020 Papaver somniferum HOM05D008063 ORTHO05D009799 2.1e-06 55.1 49 53.1
PSO210G1859 Papaver somniferum HOM05D008063 ORTHO05D009799 2.1e-06 55.1 49 53.1
PSO339G0486 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO339G1411 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO339G5258 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO357G0042 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO384G0955 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO384G1992 Papaver somniferum HOM05D008063 ORTHO05D009799 2.1e-06 55.1 49 53.1
PSO384G3270 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO386G0092 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO423G0001 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO423G0222 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO461G0011 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO461G0015 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO478G0456 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO478G2277 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO541G0209 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO541G0428 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO541G2155 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO675G0673 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO675G1137 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO700G0099 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO761G0728 Papaver somniferum HOM05D008063 ORTHO05D009799 2.1e-06 55.1 49 53.1
PSO782G4150 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO782G5623 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO832G1959 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
PSO832G2107 Papaver somniferum HOM05D000214 ORTHO05D000131 2.1e-06 55.1 49 53.1
CARHR100290 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.7e-06 54.7 48 52.1
Lj4g0023000 Lotus japonicus HOM05D000214 ORTHO05D000131 2.7e-06 54.7 49 55.1
Os01g0872900 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 2.7e-06 54.7 49 53.1
TWI12G1376 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.7e-06 54.7 48 56.2
TWI73G0294 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.7e-06 54.7 48 52.1
BolC3t14692H Brassica oleracea HOM05D000214 ORTHO05D000131 3.6e-06 54.3 47 55.3
BolC3t18138H Brassica oleracea HOM05D000214 ORTHO05D000131 3.6e-06 54.3 47 53.2
PSO063G3103 Papaver somniferum HOM05D000214 ORTHO05D000131 3.6e-06 54.3 49 53.1
SHI01657 Sapria himalayana HOM05D000214 ORTHO05D000131 3.6e-06 54.3 49 51.0
SHI16802 Sapria himalayana HOM05D000214 ORTHO05D000131 3.6e-06 54.3 49 53.1
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 4.7e-06 53.9 48 50.0
Lj2g0003740 Lotus japonicus HOM05D000214 ORTHO05D000131 4.7e-06 53.9 48 60.4
LjContig00141g0024663 Lotus japonicus HOM05D000214 ORTHO05D000131 4.7e-06 53.9 48 60.4
Solyc07g020850.1 Solanum lycopersicum HOM05D000214 ORTHO05D000131 4.7e-06 53.9 37 67.6
TWI74G0815 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.7e-06 53.9 46 50.0
TWI74G1528 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.7e-06 53.9 49 49.0
Cc09_g09240 Coffea canephora HOM05D000214 ORTHO05D000131 6.1e-06 53.5 48 52.1
PSO170G0346 Papaver somniferum HOM05D000214 ORTHO05D000131 6.1e-06 53.5 49 53.1
PSO541G5655 Papaver somniferum HOM05D000214 ORTHO05D000131 6.1e-06 53.5 49 44.9
TWI09G0764 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.1e-06 53.5 49 53.1
Atru.chr7.844 Acer truncatum HOM05D000214 ORTHO05D000131 7.9e-06 53.1 41 65.9
BolC9t59089H Brassica oleracea HOM05D000214 ORTHO05D000131 7.9e-06 53.1 47 55.3
Rhsim01G0115100 Rhododendron simsii HOM05D000214 ORTHO05D000131 7.9e-06 53.1 49 49.0
Rhsim12G0055300 Rhododendron simsii HOM05D008626 ORTHO05D010919 7.9e-06 53.1 50 46.0
SHI07031 Sapria himalayana HOM05D000214 ORTHO05D000131 7.9e-06 53.1 49 46.9
TWI31G0167 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.9e-06 53.1 48 56.2
TWI31G1070 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.9e-06 53.1 48 52.1
TWI38G2274 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.9e-06 53.1 49 55.1
TWI79G0691 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.9e-06 53.1 43 55.8


User provided reference genes

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