Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g019498.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 1.7e-129 466.1 246 100.0
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.3e-126 455.7 246 98.0
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.7e-126 454.1 246 98.0
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 1.1e-125 453.4 245 97.1
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.5e-125 452.2 246 95.1
Solyc08g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.1e-123 445.3 244 95.9
Solyc02g030462.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.9e-117 426.0 229 98.7
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 1.3e-116 423.3 229 93.4
Sopen01g015170 Solanum pennellii HOM05D000176 ORTHO05D000106 3.9e-110 401.7 227 89.4
Solyc09g150111.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.0e-70 270.8 193 77.2
Solyc10g049667.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.2e-67 257.7 228 64.5
Sopen05g012360 Solanum pennellii HOM05D000176 ORTHO05D000106 1.4e-62 243.8 229 60.3
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 2.2e-52 209.9 253 51.0
Sopen08g006090 Solanum pennellii HOM05D000176 ORTHO05D000106 1.0e-49 201.1 251 49.4
Solyc07g019577.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.3e-49 199.9 246 49.2
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 1.2e-47 194.1 110 87.3
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 3.6e-47 192.6 236 50.0
PGSC0003DMG400019874 Solanum tuberosum HOM05D000176 ORTHO05D014553 2.3e-46 189.9 237 50.6
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.8e-46 188.3 236 49.6
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 5.6e-40 168.7 236 46.2
Solyc07g042335.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.2e-36 156.8 176 52.8
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.1e-35 151.8 248 40.3
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-34 150.2 71 100.0
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-34 150.2 71 100.0
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-34 150.2 71 100.0
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.6e-34 149.1 229 44.5
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.0e-34 148.7 75 94.7
Solyc12g042603.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.5e-32 144.1 158 55.1
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.4e-28 128.3 234 40.2
Sopen07g014370 Solanum pennellii HOM05D000176 ORTHO05D000106 8.4e-28 128.3 245 35.5
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 9.3e-27 124.8 221 40.7
Sopen09g016220 Solanum pennellii HOM05D000176 ORTHO05D000106 3.5e-26 122.9 243 37.0
Solyc01g033995.1 Solanum lycopersicum HOM05D000638 ORTHO05D000801 3.9e-25 119.4 167 44.3
Solyc08g014245.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.6e-25 118.6 89 62.9
CAN.G1611.3 Capsicum annuum HOM05D000176 ORTHO05D014553 2.1e-23 113.6 133 52.6
Solyc11g150105.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.6e-23 112.8 84 63.1
CAN.G650.30 Capsicum annuum HOM05D000176 ORTHO05D014553 2.4e-22 110.2 133 49.6
Solyc10g018420.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.0e-22 109.4 78 67.9
CAN.G1102.4 Capsicum annuum HOM05D000176 ORTHO05D014553 1.2e-21 107.8 254 32.7
CAN.G802.4 Capsicum annuum HOM05D000176 ORTHO05D000106 1.2e-21 107.8 130 50.0
Solyc05g150125.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.4e-21 106.3 95 55.8
Solyc04g050685.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.9e-21 104.8 93 55.9
Sopen06g015770 Solanum pennellii HOM05D000176 ORTHO05D000106 1.7e-20 104.0 81 60.5
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-20 102.1 78 62.8
CAN.G1612.3 Capsicum annuum HOM05D000176 ORTHO05D000106 1.9e-19 100.5 57 80.7
Sopen09g010870 Solanum pennellii HOM05D000176 ORTHO05D000106 5.4e-19 99.0 234 32.9
Sopen04g021620 Solanum pennellii HOM05D000176 ORTHO05D000106 6.0e-18 95.5 81 58.0
Solyc06g050375.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 1.3e-17 94.4 144 45.8
Solyc03g059425.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.8e-17 94.0 94 52.1
CAN.G1218.17 Capsicum annuum HOM05D000176 ORTHO05D014553 8.7e-17 91.7 109 50.5
Sopen06g015550 Solanum pennellii HOM05D000176 ORTHO05D014553 1.1e-16 91.3 127 46.5
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 2.1e-15 87.0 107 48.6
PGSC0003DMG400000655 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.2e-15 85.5 63 61.9
Solyc02g065114.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.5e-13 80.9 63 60.3
CAN.G91.12 Capsicum annuum HOM05D000176 ORTHO05D014553 4.5e-13 79.3 189 32.3
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 7.6e-13 78.6 130 44.6
PGSC0003DMG400006264 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.7e-12 77.4 53 66.0
PGSC0003DMG400021588 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.8e-12 76.3 243 29.6
Solyc07g150135.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.6e-10 69.3 181 35.9
PGSC0003DMG400041083 Solanum tuberosum HOM05D000176 ORTHO05D014553 3.3e-08 63.2 88 47.7
Solyc02g065112.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.6e-08 62.4 134 35.8
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 1.3e-07 61.2 225 28.4
CAN.G48.43 Capsicum annuum HOM05D001529 ORTHO05D014553 9.0e-06 55.1 75 44.0


User provided reference genes

Program Settings