Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g018090.4 Solanum lycopersicum HOM05D002952 ORTHO05D003361 2.7e-146 521.9 257 100.0
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 6.7e-145 517.3 257 99.2
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 3.2e-131 471.9 257 89.5
Peaxi162Scf00231g00918 Petunia axillaris HOM05D002952 ORTHO05D003361 4.1e-126 454.9 255 85.5
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 4.5e-117 424.9 248 84.3
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 4.7e-106 388.3 253 71.5
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 2.8e-103 379.0 255 70.6
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 1.6e-101 373.2 255 69.8
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 1.0e-100 370.5 253 68.4
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 1.5e-99 366.7 254 69.3
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 8.0e-98 360.9 253 66.4
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 2.3e-97 359.4 252 67.5
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.5e-96 356.7 253 68.4
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 4.4e-96 355.1 253 66.8
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 2.9e-95 352.4 253 66.8
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 6.4e-95 351.3 244 68.0
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 8.3e-95 350.9 253 64.8
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 1.1e-94 350.5 244 68.0
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 1.4e-94 350.1 253 65.6
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.4e-94 350.1 253 64.4
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 1.8e-94 349.7 253 64.4
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.4e-94 349.4 253 64.0
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 4.1e-94 348.6 256 64.8
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 5.4e-94 348.2 247 67.6
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 7.0e-94 347.8 254 65.7
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 9.2e-94 347.4 247 68.0
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.6e-93 346.7 253 64.4
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 3.5e-93 345.5 253 65.6
Cfa013462 Carpinus fangiana HOM05D002952 ORTHO05D003361 4.6e-93 345.1 253 65.2
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 4.6e-93 345.1 251 65.7
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 1.7e-92 343.2 253 64.8
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 8.6e-92 340.9 251 64.9
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 1.1e-91 340.5 253 62.1
unitig_26.g9160 Utricularia gibba HOM05D002952 ORTHO05D003361 1.1e-91 340.5 245 64.9
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 2.5e-91 339.3 247 66.8
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 3.3e-91 339.0 253 61.7
Cpa.g.sc115.66 Carica papaya HOM05D002952 ORTHO05D003361 5.6e-91 338.2 253 62.8
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 7.3e-91 337.8 247 65.2
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 7.3e-91 337.8 251 63.7
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 9.5e-91 337.4 254 64.2
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 1.6e-90 336.7 247 63.2
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 2.8e-90 335.9 254 64.2
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 6.2e-90 334.7 247 62.8
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 1.0e-89 334.0 275 60.0
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 1.4e-89 333.6 247 62.8
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 6.8e-89 331.3 263 60.8
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 1.5e-88 330.1 247 63.6
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 2.6e-88 329.3 254 61.0
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla HOM05D002952 ORTHO05D003361 3.4e-88 328.9 229 67.2
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 4.4e-88 328.6 251 61.8
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 7.5e-88 327.8 254 61.8
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 1.3e-87 327.0 247 64.0
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 1.7e-87 326.6 254 61.8
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 2.2e-87 326.2 251 61.8
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 2.9e-87 325.9 254 60.6
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.9e-87 325.9 253 60.9
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 3.7e-87 325.5 254 61.0
Lalb_Chr13g0299881 Lupinus albus HOM05D002952 ORTHO05D003361 6.4e-87 324.7 247 62.8
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 8.3e-87 324.3 254 60.6
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 1.1e-86 323.9 251 62.2
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 1.1e-86 323.9 254 61.0
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 1.1e-86 323.9 253 61.7
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 5.4e-86 321.6 244 61.1
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 1.2e-85 320.5 254 61.0
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 1.0e-84 317.4 270 57.4
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 1.7e-84 316.6 248 60.9
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 2.3e-84 316.2 251 61.4
Ca_21260_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 3.9e-84 315.5 256 60.2
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 6.6e-84 314.7 248 62.1
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 8.6e-84 314.3 251 61.4
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 8.6e-84 314.3 247 59.1
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 1.1e-83 313.9 248 60.5
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 1.1e-83 313.9 250 60.4
TPR.G5387 Trifolium pratense HOM05D002952 ORTHO05D003361 1.5e-83 313.5 258 58.9
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 5.6e-83 311.6 253 60.1
THA.LOC104804523 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 5.6e-83 311.6 253 60.1
THA.LOC104804524 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 5.6e-83 311.6 253 60.1
THA.LOC104804525 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 5.6e-83 311.6 253 60.1
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 7.3e-83 311.2 253 60.5
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 1.2e-82 310.5 257 58.0
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.2e-82 310.5 251 59.0
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 2.8e-82 309.3 251 59.0
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 2.8e-82 309.3 248 60.1
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 4.7e-82 308.5 254 57.9
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 4.7e-82 308.5 253 60.5
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 1.1e-81 307.4 248 61.7
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 4.0e-81 305.4 241 61.4
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 4.0e-81 305.4 243 59.7
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 8.9e-81 304.3 243 60.1
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 1.2e-80 303.9 265 57.0
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 2.0e-80 303.1 248 57.3
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 2.0e-80 303.1 248 57.3
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 3.4e-80 302.4 237 61.6
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 3.4e-80 302.4 244 59.0
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 5.8e-80 301.6 248 56.9
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 9.8e-80 300.8 263 57.0
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 2.9e-79 299.3 263 56.7
VMungo1215G0843 Vigna mungo HOM05D002952 ORTHO05D003361 8.3e-79 297.7 252 57.9
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.4e-78 297.0 256 57.0
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 1.6e-77 293.5 248 56.0
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 6.0e-77 291.6 247 57.1
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 6.6e-76 288.1 249 55.4
CARHR292530 Cardamine hirsuta HOM05D002952 ORTHO05D003361 3.3e-75 285.8 248 56.0
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 1.6e-74 283.5 244 57.4
Ah.09g229430 Amaranthus hybridus HOM05D002952 ORTHO05D003361 2.0e-72 276.6 228 58.8
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 3.4e-72 275.8 255 53.3
SGA_v2.0_scaffold112G31613 Striga asiatica HOM05D002952 ORTHO05D003361 3.4e-72 275.8 202 62.4
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 2.2e-71 273.1 244 57.0
Nitab4.5_0006774g0010 Nicotiana tabacum HOM05D002952 ORTHO05D003361 3.0e-68 262.7 184 72.3
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 2.8e-66 256.1 251 52.2
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 1.2e-64 250.8 254 50.4
Carub.0005s0694 Capsella rubella HOM05D002952 ORTHO05D003361 4.4e-64 248.8 197 60.9
Actinidia25392 Actinidia chinensis HOM05D002952 ORTHO05D003361 2.1e-61 240.0 169 66.3
Hund12689 Selenicereus undatus HOM05D002952 ORTHO05D003361 1.9e-59 233.4 259 48.3
QL02p047151 Quercus lobata HOM05D002952 ORTHO05D003361 3.8e-55 219.2 145 70.3
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 5.4e-54 215.3 164 63.4
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 9.3e-54 214.5 245 47.8
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 7.9e-53 211.5 164 60.4
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 2.9e-47 193.0 142 62.7
CDE05G2761 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.1e-46 191.0 164 55.5
CDE05G1903 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 3.5e-45 186.0 152 58.6
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 1.4e-41 174.1 252 41.3
CBR_g9125 Chara braunii HOM05D002952 ORTHO05D003361 5.3e-41 172.2 246 39.8
Actinidia29954 Actinidia chinensis HOM05D002952 ORTHO05D003361 3.4e-40 169.5 244 41.4
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 5.8e-40 168.7 248 36.3
SMO356G0480 Selaginella moellendorffii HOM05D002952 ORTHO05D003361 2.7e-37 159.8 245 38.4
Pp3c16_8730 Physcomitrium patens HOM05D002952 ORTHO05D003361 1.5e-35 154.1 246 36.6
TAR633G2330 Trochodendron aralioides HOM05D002952 ORTHO05D003361 5.7e-35 152.1 251 37.5
RcHm_v2.0_Chr3g0475531 Rosa chinensis HOM05D002952 ORTHO05D003361 2.1e-34 150.2 246 37.0
PGR004G2265 Punica granatum HOM05D002952 ORTHO05D003361 4.1e-33 146.0 254 35.0
Rhsim04G0130200 Rhododendron simsii HOM05D002952 ORTHO05D003361 5.9e-32 142.1 252 34.1
CSS0009413 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 7.6e-32 141.7 247 36.4
FAN09G1177 Fragaria x ananassa HOM05D002952 ORTHO05D003361 7.6e-32 141.7 247 36.4
FvH4_6g20080 Fragaria vesca HOM05D002952 ORTHO05D003361 1.3e-31 141.0 246 35.8
COL.COLO4_29595 Corchorus olitorius HOM05D002952 ORTHO05D003361 2.9e-31 139.8 255 36.1
FAN05G1787 Fragaria x ananassa HOM05D002952 ORTHO05D003361 3.8e-31 139.4 246 35.4
CANSAT64G1472 Cannabis sativa HOM05D002952 ORTHO05D003361 6.5e-31 138.7 244 34.0
FAN14G0567 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.5e-31 138.7 246 35.4
vmacro08846 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 1.1e-30 137.9 253 34.4
Sc02g0000570 Simmondsia chinensis HOM05D002952 ORTHO05D003361 1.4e-30 137.5 240 34.6
Atru.chr8.1386 Acer truncatum HOM05D002952 ORTHO05D003361 1.9e-30 137.1 258 36.8
CiPaw.10G016000 Carya illinoinensis HOM05D002952 ORTHO05D003361 2.5e-30 136.7 241 34.4
Eucgr.A02600 Eucalyptus grandis HOM05D002952 ORTHO05D003361 3.2e-30 136.3 252 34.5
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 5.5e-30 135.6 245 33.9
Haze_19692 Corylus avellana HOM05D002952 ORTHO05D003361 7.2e-30 135.2 242 35.1
Duzib093G0565 Durio zibethinus HOM05D002952 ORTHO05D003361 7.2e-30 135.2 243 35.4
Cfa016675 Carpinus fangiana HOM05D002952 ORTHO05D003361 9.3e-30 134.8 242 35.1
Lj5g0011168 Lotus japonicus HOM05D002952 ORTHO05D003361 1.2e-29 134.4 241 34.4
MD14G1036800 Malus domestica HOM05D002952 ORTHO05D003361 1.2e-29 134.4 243 36.2
PSO384G1939 Papaver somniferum HOM05D002952 ORTHO05D003361 1.2e-29 134.4 243 36.2
Prupe.7G097500 Prunus persica HOM05D002952 ORTHO05D003361 2.7e-29 133.3 246 34.6
Glyma.02G198100 Glycine max HOM05D002952 ORTHO05D003361 3.6e-29 132.9 247 34.8
Phvul.007G269200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 1.0e-28 131.3 245 35.1
Potri.006G204600 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.3e-28 131.0 244 33.2
Ca_11716_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 3.0e-28 129.8 241 34.4
Gorai.006G150500 Gossypium raimondii HOM05D002952 ORTHO05D003361 3.0e-28 129.8 246 35.4
QL07p037253 Quercus lobata HOM05D002952 ORTHO05D003361 3.0e-28 129.8 244 33.6
Gohir.A09G135300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 6.7e-28 128.6 241 34.4
MD12G1037800 Malus domestica HOM05D002952 ORTHO05D003361 8.7e-28 128.3 243 32.9
Psat6g084840 Pisum sativum HOM05D002952 ORTHO05D003361 1.9e-27 127.1 241 34.4
Dinv12331 Davidia involucrata HOM05D002952 ORTHO05D003361 4.3e-27 125.9 247 32.4
Thecc.05G101800 Theobroma cacao HOM05D002952 ORTHO05D003361 1.3e-26 124.4 242 34.3
FAN02G4506 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.6e-26 124.0 245 33.5
Manes.08G032200 Manihot esculenta HOM05D002952 ORTHO05D003361 1.6e-26 124.0 246 32.9
TPR.G31863 Trifolium pratense HOM05D002952 ORTHO05D003361 2.2e-26 123.6 247 33.2
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis HOM05D002952 ORTHO05D003361 4.8e-26 122.5 168 38.7
SEGI_10738 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 6.3e-26 122.1 162 41.4
ATR0772G085 Amborella trichopoda HOM05D002952 ORTHO05D003361 1.4e-25 120.9 151 41.7
Ciclev10011126m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.4e-25 120.9 242 33.5
HanXRQChr03g0065431 Helianthus annuus HOM05D002952 ORTHO05D003361 3.1e-25 119.8 106 60.4
Cc06_g06410 Coffea canephora HOM05D002952 ORTHO05D003361 4.1e-25 119.4 251 34.7
Lj1C1049T3 Lonicera japonica HOM05D002952 ORTHO05D003361 3.8e-23 112.8 244 31.6
Glyma.10G078851 Glycine max HOM05D002952 ORTHO05D003361 4.2e-22 109.4 216 31.9
Medtr1g057130 Medicago truncatula HOM05D002952 ORTHO05D003361 4.2e-22 109.4 241 32.8
Sabra06G0157600 Salix brachista HOM05D002952 ORTHO05D003361 2.1e-21 107.1 312 26.6
Actinidia07937 Actinidia chinensis HOM05D002952 ORTHO05D003361 3.9e-20 102.8 141 36.9
VMungo0720G0970 Vigna mungo HOM05D002952 ORTHO05D003361 8.2e-18 95.1 141 35.5
EL10Ac7g16807 Beta vulgaris HOM05D002952 ORTHO05D003361 1.0e-15 88.2 243 29.6
PRCOL_00003380 Prasinoderma coloniale HOM05D002952 ORTHO05D003361 4.2e-14 82.8 166 32.5
CDE02G4171 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.2e-13 81.3 174 30.5
Cre12.g515250 Chlamydomonas reinhardtii HOM05D002952 ORTHO05D003361 2.7e-13 80.1 234 26.1
Gohir.D09G131900 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.7e-13 80.1 160 33.1
Phvul.009G235200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 9.1e-09 65.1 69 46.4
Actinidia06176 Actinidia chinensis HOM05D002952 ORTHO05D003361 5.5e-06 55.8 80 38.8


User provided reference genes

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