Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-70 267.3 130 100.0
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-36 156.8 123 65.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-34 147.5 120 64.2
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-33 144.4 119 64.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-32 142.5 114 65.8
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-32 142.1 119 63.0
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-31 138.7 108 63.0
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-29 133.7 124 59.7
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-29 133.7 100 68.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 5.2e-29 131.3 100 67.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-29 131.3 122 54.9
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-29 131.0 126 55.6
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 9.9e-28 127.1 114 60.5
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-27 126.3 90 77.8
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 6.4e-27 124.4 108 60.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-26 123.6 136 49.3
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-26 122.5 121 56.2
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-26 121.3 121 54.5
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-25 119.8 105 60.0
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-24 115.5 104 59.6
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-24 115.2 119 54.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-24 115.2 114 55.3
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.9e-24 115.2 130 48.5
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-24 114.8 127 50.4
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-23 113.6 104 55.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-23 113.6 121 52.1
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.5e-23 113.2 120 53.3
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.2e-22 110.2 121 50.4
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-22 109.8 121 51.2
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-21 107.1 108 54.6
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 4.0e-21 105.1 77 66.2
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-21 105.1 126 49.2
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 8.9e-21 104.0 99 56.6
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-20 103.6 119 52.9
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-20 101.7 98 52.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 9.9e-20 100.5 107 48.6
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-19 99.4 122 45.9
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-19 98.2 107 52.3
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-18 96.3 108 53.7
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.2e-18 95.5 179 36.3
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-18 94.0 108 52.8
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-17 93.2 109 46.8
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 7.8e-17 90.9 68 66.2
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.7e-16 87.4 50 82.0
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-15 87.0 104 51.9
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.6e-15 84.7 74 56.8
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.3e-15 84.3 73 56.2
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-14 82.4 83 53.0
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.2e-12 77.0 101 42.6
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-12 75.5 90 54.4
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-10 70.5 87 48.3
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-10 68.9 82 40.2
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-10 68.6 82 40.2
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.1e-10 67.8 55 54.5
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-10 67.4 62 46.8
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-09 65.9 62 43.5
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-09 65.5 62 43.5
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-09 65.5 62 45.2
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 4.6e-09 65.1 124 33.1
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-09 64.3 56 48.2
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-08 63.5 100 34.0
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-08 63.5 66 42.4
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-08 63.2 111 35.1
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-08 63.2 61 44.3
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-08 62.4 59 44.1
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-08 62.4 59 47.5
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-08 62.4 62 43.5
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-08 61.2 66 40.9
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-07 60.5 76 36.8
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-07 60.1 50 54.0
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.5e-07 59.3 66 50.0
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 4.3e-07 58.5 119 31.9
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-07 58.5 111 33.3
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 5.6e-07 58.2 89 36.0
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.6e-07 58.2 67 38.8
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 7.3e-07 57.8 108 33.3
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 7.3e-07 57.8 120 32.5
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 9.6e-07 57.4 66 48.5
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-06 57.0 90 35.6
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-06 56.6 114 34.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-06 56.6 94 36.2
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.6e-06 56.6 168 26.2
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-06 56.6 68 42.6
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-06 56.2 93 36.6
Hund00757 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.1e-06 56.2 53 54.7
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-06 55.8 111 32.4
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 3.6e-06 55.5 112 34.8
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 6.2e-06 54.7 83 34.9
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 6.2e-06 54.7 69 39.1
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 6.2e-06 54.7 77 37.7
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 8.1e-06 54.3 99 33.3
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 8.1e-06 54.3 99 33.3
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.1e-06 54.3 51 45.1
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 8.1e-06 54.3 51 45.1


User provided reference genes

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