Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.3e-92 340.9 159 100.0
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 1.5e-91 339.3 159 99.4
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 2.3e-87 325.5 159 95.0
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.1e-84 316.6 159 91.8
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.5e-83 312.8 155 92.3
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 8.5e-74 280.4 151 83.4
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.5e-73 278.9 151 83.4
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 2.1e-72 275.8 150 83.3
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 2.7e-72 275.4 150 82.7
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 6.1e-72 274.2 151 82.1
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.3e-71 272.3 151 81.5
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.3e-71 272.3 151 80.8
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 4.0e-71 271.6 151 80.1
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 4.0e-71 271.6 151 80.1
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.6e-70 268.9 148 81.8
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 4.4e-70 268.1 151 80.8
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 5.7e-70 267.7 148 82.4
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 7.5e-70 267.3 150 80.7
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 9.8e-70 266.9 151 78.8
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 9.8e-70 266.9 148 81.8
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.3e-69 266.5 151 80.1
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.2e-69 265.8 151 79.5
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 4.8e-69 264.6 151 78.1
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 4.8e-69 264.6 150 76.7
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.8e-69 264.6 151 76.2
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.8e-69 264.6 151 76.2
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.3e-69 264.2 151 75.5
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 6.3e-69 264.2 151 77.5
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 6.3e-69 264.2 150 78.7
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 8.3e-69 263.8 151 78.8
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.1e-68 263.5 154 74.0
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.4e-68 263.1 150 76.7
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.8e-68 262.7 149 79.2
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 2.4e-68 262.3 151 75.5
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 2.4e-68 262.3 151 78.1
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 5.4e-68 261.2 150 77.3
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 9.1e-68 260.4 150 76.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 9.1e-68 260.4 146 78.1
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 9.1e-68 260.4 130 90.8
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 9.1e-68 260.4 150 75.3
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-67 260.0 154 73.4
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.6e-67 259.6 146 79.5
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.6e-67 259.6 151 74.2
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.6e-67 259.6 150 75.3
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.6e-67 259.6 150 75.3
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.6e-67 259.6 150 75.3
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.7e-67 258.8 149 75.2
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.7e-67 258.8 150 75.3
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 3.5e-67 258.5 154 73.4
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.5e-67 258.5 150 74.0
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 4.5e-67 258.1 150 74.0
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 5.9e-67 257.7 150 76.0
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 5.9e-67 257.7 151 76.8
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 7.7e-67 257.3 150 75.3
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.3e-66 256.5 150 75.3
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.3e-66 256.5 150 77.3
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.7e-66 256.1 150 76.7
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.7e-66 256.1 150 74.0
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 2.2e-66 255.8 151 71.5
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 2.2e-66 255.8 150 74.7
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 3.8e-66 255.0 151 76.8
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.8e-66 255.0 156 75.6
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 5.0e-66 254.6 151 72.8
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 5.0e-66 254.6 151 77.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.0e-66 254.6 150 73.3
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 5.0e-66 254.6 150 76.7
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 6.5e-66 254.2 151 71.5
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 6.5e-66 254.2 152 75.7
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 8.5e-66 253.8 150 77.3
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.1e-65 253.4 150 74.0
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.1e-65 253.4 150 73.3
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.1e-65 253.4 152 76.3
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 1.1e-65 253.4 148 77.0
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.5e-65 253.1 150 77.3
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.9e-65 252.7 151 74.8
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.9e-65 252.7 148 76.4
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 2.5e-65 252.3 151 70.9
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 2.5e-65 252.3 151 70.9
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 2.5e-65 252.3 151 70.9
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 2.5e-65 252.3 151 73.5
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 3.2e-65 251.9 151 75.5
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 3.2e-65 251.9 151 71.5
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 4.2e-65 251.5 151 70.9
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.2e-65 251.5 148 76.4
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 5.5e-65 251.1 151 74.2
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 9.4e-65 250.4 151 71.5
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 9.4e-65 250.4 151 71.5
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 9.4e-65 250.4 151 71.5
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 9.4e-65 250.4 153 73.9
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.2e-64 250.0 151 70.9
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.1e-64 249.2 150 76.7
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 2.1e-64 249.2 149 76.5
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 2.7e-64 248.8 151 74.2
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 3.6e-64 248.4 151 71.5
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 3.6e-64 248.4 151 71.5
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 3.6e-64 248.4 150 75.3
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 4.7e-64 248.1 151 70.2
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 4.7e-64 248.1 151 73.5
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 6.1e-64 247.7 151 70.2
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 6.1e-64 247.7 151 70.2
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.4e-63 246.5 151 73.5
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 1.4e-63 246.5 152 75.0
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 3.0e-63 245.4 151 75.5
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 6.8e-63 244.2 148 76.4
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 8.8e-63 243.8 180 62.8
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.2e-62 243.4 149 74.5
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 2.0e-62 242.7 148 73.6
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 7.5e-62 240.7 153 68.6
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 7.5e-62 240.7 148 73.0
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 7.5e-62 240.7 146 72.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 7.5e-62 240.7 148 75.0
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 7.5e-62 240.7 151 71.5
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 4.9e-61 238.0 142 74.6
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.1e-60 236.9 148 72.3
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 5.4e-60 234.6 150 68.7
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.6e-59 233.0 150 68.0
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 2.7e-59 232.3 151 71.5
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.7e-59 232.3 148 68.9
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 4.5e-59 231.5 149 66.4
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.7e-59 230.7 149 67.1
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.0e-58 230.3 148 68.2
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-57 226.9 146 70.5
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 5.2e-55 218.0 149 61.7
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 8.9e-55 217.2 147 66.7
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 1.9e-49 199.5 144 59.7
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.7e-48 194.9 144 59.0
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 1.2e-46 190.3 150 60.0
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.5e-46 189.9 108 78.7
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 4.1e-44 181.8 155 56.1
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.4e-39 166.8 147 53.1
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 4.4e-38 161.8 84 84.5
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 7.5e-38 161.0 84 85.7
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 6.6e-26 121.3 118 49.2
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.4e-22 108.6 83 53.0
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.9e-12 76.6 60 50.0
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 9.0e-07 57.8 35 65.7


User provided reference genes

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