Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g017330.3 Solanum lycopersicum HOM05D018974 ORTHO05D014557 4.4e-120 434.9 261 100.0
Solyc07g009580.2 Solanum lycopersicum HOM05D018974 ORTHO05D014557 5.3e-97 358.2 350 68.6
Sopen07g005420 Solanum pennellii HOM05D018974 ORTHO05D014557 6.0e-93 344.7 340 62.1
Solyc07g009560.3 Solanum lycopersicum HOM05D018974 ORTHO05D014557 5.4e-33 145.6 79 88.6
Solyc07g017310.1 Solanum lycopersicum HOM05D018974 ORTHO05D000279 2.7e-32 143.3 79 88.6
PGSC0003DMG400013776 Solanum tuberosum HOM05D000196 ORTHO05D000279 2.0e-27 127.1 126 54.8
Solyc07g019550.1 Solanum lycopersicum HOM05D000196 ORTHO05D000279 1.3e-23 114.4 197 36.0
Solyc07g014587.1 Solanum lycopersicum HOM05D018974 ORTHO05D389868 1.7e-15 87.4 105 44.8
CAN.G548.10 Capsicum annuum HOM05D000196 ORTHO05D043446 2.6e-11 73.6 96 50.0
Nitab4.5_0004560g0010 Nicotiana tabacum HOM05D000196 ORTHO05D000279 7.6e-11 72.0 178 35.4
Solyc03g026250.3 Solanum lycopersicum HOM05D000196 ORTHO05D000279 9.9e-11 71.6 236 25.4
Dinv28489 Davidia involucrata HOM05D000196 ORTHO05D000279 2.2e-10 70.5 167 32.9
Nitab4.5_0002117g0090 Nicotiana tabacum HOM05D000196 ORTHO05D000279 4.9e-10 69.3 198 30.8
GSVIVG01010626001 Vitis vinifera HOM05D000196 ORTHO05D000279 8.4e-10 68.6 168 29.8
Nitab4.5_0005233g0020 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.4e-09 67.8 180 37.8
GSVIVG01010627001 Vitis vinifera HOM05D000196 ORTHO05D000279 3.2e-09 66.6 172 29.7
SGA_v2.0_scaffold2G01083 Striga asiatica HOM05D000196 ORTHO05D000279 9.2e-09 65.1 177 33.3
TAR656G0004 Trochodendron aralioides HOM05D000196 ORTHO05D000279 2.1e-08 63.9 170 30.0
Ciclev10006586m.g Citrus clementina HOM05D000196 ORTHO05D000279 1.0e-07 61.6 159 27.7
Duzib084G0854 Durio zibethinus HOM05D000196 ORTHO05D000279 1.0e-07 61.6 175 31.4
Peaxi162Scf00557g00071 Petunia axillaris HOM05D000196 ORTHO05D000279 1.0e-07 61.6 179 34.6
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 1.3e-07 61.2 169 29.0
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 3.0e-07 60.1 165 29.7
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 3.0e-07 60.1 248 25.0
Migut.F01146 Erythranthe guttata HOM05D000196 ORTHO05D000279 6.6e-07 58.9 208 26.0
Thecc.03G170200 Theobroma cacao HOM05D000196 ORTHO05D000279 6.6e-07 58.9 170 27.6
Atru.chr12.1197 Acer truncatum HOM05D000196 ORTHO05D000279 8.6e-07 58.5 169 27.8
MD01G1047800 Malus domestica HOM05D000196 ORTHO05D000279 8.6e-07 58.5 161 26.7
Haze_13759 Corylus avellana HOM05D000196 ORTHO05D000279 1.9e-06 57.4 174 28.2
COL.COLO4_12629 Corchorus olitorius HOM05D000196 ORTHO05D000279 2.5e-06 57.0 168 25.6
Nitab4.5_0001083g0040 Nicotiana tabacum HOM05D000196 ORTHO05D000279 7.3e-06 55.5 168 28.6
SalBow4G1616 Salvia bowleyana HOM05D000196 ORTHO05D000279 7.3e-06 55.5 144 30.6


User provided reference genes

Program Settings