Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 1.6e-36 157.1 102 100.0
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 6.5e-30 135.2 74 87.8
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 5.5e-29 132.1 74 86.5
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 6.6e-22 108.6 71 77.5
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-19 101.3 92 57.6
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 4.9e-17 92.4 82 61.0
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 4.9e-17 92.4 82 61.0
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.4e-16 90.9 92 52.2
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.1e-16 89.4 92 54.3
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.6e-15 87.4 92 51.1
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 5.9e-15 85.5 98 48.0
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-14 84.7 92 51.1
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 3.9e-14 82.8 84 54.8
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-14 82.4 84 53.6
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-14 82.4 92 48.9
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 8.6e-14 81.6 103 43.7
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.9e-13 80.5 103 43.7
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.3e-13 79.3 77 50.6
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.3e-13 79.3 103 42.7
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.5e-13 78.2 80 55.0
Sopen07g005950 Solanum pennellii HOM05D007556 ORTHO05D002252 2.8e-12 76.6 64 93.8
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 3.6e-12 76.3 72 50.0
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 4.0e-11 72.8 103 40.8
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 71.2 77 48.1
PGSC0003DMG400009557 Solanum tuberosum HOM05D007556 ORTHO05D396259 7.5e-10 68.6 41 73.2
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 3.7e-09 66.2 92 41.3
Sopen07g005930 Solanum pennellii HOM05D057502 ORTHO05D002252 6.4e-09 65.5 74 51.4
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 2.4e-08 63.5 98 42.9
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 4.1e-08 62.8 92 40.2
Peaxi162Scf00684g00330 Petunia axillaris HOM05D058148 ORTHO05D306638 7.0e-08 62.0 66 50.0
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 9.2e-08 61.6 94 39.4
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 9.2e-08 61.6 101 36.6
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.0e-07 60.5 100 38.0
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 2.7e-07 60.1 69 39.1
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 3.5e-07 59.7 51 51.0
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 4.6e-07 59.3 101 34.7
TAR628G1279 Trochodendron aralioides HOM05D007556 ORTHO05D002252 4.6e-07 59.3 67 44.8
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 4.6e-07 59.3 96 34.4
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.8e-07 58.5 89 37.1
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.0e-06 58.2 97 34.0
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.3e-06 57.8 94 35.1
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.3e-06 57.0 72 37.5
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.0e-06 56.6 97 33.0
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.0e-06 56.6 96 32.3
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 5.0e-06 55.8 87 39.1
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 5.0e-06 55.8 77 40.3
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 8.6e-06 55.1 82 32.9
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 8.6e-06 55.1 82 32.9


User provided reference genes

Program Settings