Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.5e-101 372.9 187 100.0
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 4.6e-79 298.1 171 85.4
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 4.4e-69 265.0 187 71.1
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 6.3e-68 261.2 187 70.6
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 3.2e-64 248.8 179 71.5
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 1.6e-63 246.5 162 74.1
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 2.1e-63 246.1 141 84.4
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.7e-52 208.8 120 83.3
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 1.6e-50 203.4 147 68.7
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 1.1e-48 197.2 147 64.6
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 1.9e-48 196.4 157 61.1
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 1.9e-48 196.4 175 56.6
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 5.5e-48 194.9 147 65.3
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.5e-48 194.9 147 63.9
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 1.2e-47 193.7 147 64.6
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 1.6e-47 193.4 147 63.3
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 2.1e-47 193.0 142 66.9
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 2.1e-47 193.0 148 63.5
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 2.7e-47 192.6 151 61.6
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 3.6e-47 192.2 147 62.6
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 3.6e-47 192.2 178 55.6
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 4.7e-47 191.8 163 59.5
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 4.7e-47 191.8 179 55.9
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 8.0e-47 191.0 145 63.4
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 1.0e-46 190.7 176 56.2
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 1.4e-46 190.3 148 64.2
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 2.3e-46 189.5 151 62.9
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 2.3e-46 189.5 148 63.5
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 2.3e-46 189.5 157 58.6
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 3.0e-46 189.1 163 54.0
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 3.0e-46 189.1 173 56.6
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 3.0e-46 189.1 148 60.8
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 3.0e-46 189.1 148 60.8
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 3.0e-46 189.1 146 61.0
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 4.0e-46 188.7 146 63.7
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 6.8e-46 188.0 153 56.9
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 6.8e-46 188.0 147 61.9
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 6.8e-46 188.0 148 62.2
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 8.8e-46 187.6 147 61.9
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 8.8e-46 187.6 146 63.7
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 1.2e-45 187.2 146 61.0
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 1.5e-45 186.8 148 62.2
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 1.5e-45 186.8 148 62.8
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 2.0e-45 186.4 145 64.1
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 2.6e-45 186.0 178 54.5
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 2.6e-45 186.0 158 59.5
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 3.4e-45 185.7 167 57.5
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 3.4e-45 185.7 149 59.7
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 3.4e-45 185.7 147 61.9
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.4e-45 185.7 166 57.2
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 4.4e-45 185.3 145 62.1
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 4.4e-45 185.3 148 62.2
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 5.7e-45 184.9 145 63.4
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 5.7e-45 184.9 154 59.7
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 5.7e-45 184.9 147 61.2
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 7.5e-45 184.5 148 60.8
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 7.5e-45 184.5 168 54.2
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 7.5e-45 184.5 145 60.7
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 7.5e-45 184.5 146 61.0
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 7.5e-45 184.5 141 64.5
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 7.5e-45 184.5 182 56.6
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 7.5e-45 184.5 145 60.7
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 9.8e-45 184.1 174 53.4
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 9.8e-45 184.1 144 61.8
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.3e-44 183.7 147 60.5
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 1.3e-44 183.7 161 58.4
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 1.7e-44 183.3 148 60.8
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 1.7e-44 183.3 146 61.6
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 1.7e-44 183.3 148 60.8
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 2.2e-44 183.0 171 53.8
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 2.2e-44 183.0 171 53.8
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 2.2e-44 183.0 152 56.6
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 4.9e-44 181.8 147 59.9
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 4.9e-44 181.8 147 59.9
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 6.3e-44 181.4 147 60.5
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 1.4e-43 180.3 153 56.2
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 1.4e-43 180.3 145 60.0
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 3.1e-43 179.1 181 53.6
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 4.1e-43 178.7 174 53.4
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 4.1e-43 178.7 178 51.7
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 4.1e-43 178.7 175 53.1
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 7.0e-43 177.9 165 53.9
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 9.1e-43 177.6 149 57.0
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 9.1e-43 177.6 146 56.8
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 2.0e-42 176.4 150 58.7
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 2.0e-42 176.4 146 58.9
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.7e-42 176.0 142 62.0
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 5.9e-42 174.9 171 53.8
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.0e-41 174.1 148 58.8
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 2.3e-41 172.9 188 51.6
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.9e-41 172.6 135 61.5
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 6.6e-41 171.4 145 57.9
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 8.6e-41 171.0 179 51.4
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 1.1e-40 170.6 152 55.3
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.1e-40 170.6 163 54.6
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 1.9e-40 169.9 92 90.2
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 2.5e-40 169.5 161 50.3
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 7.2e-40 167.9 153 54.2
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 7.2e-40 167.9 143 58.0
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 1.2e-39 167.2 140 60.0
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 1.6e-39 166.8 177 53.1
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 3.6e-39 165.6 131 60.3
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 4.7e-39 165.2 146 57.5
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 4.7e-39 165.2 148 58.1
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 6.1e-39 164.9 149 55.0
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.0e-38 164.1 153 57.5
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 3.0e-38 162.5 162 53.1
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 6.8e-38 161.4 148 57.4
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 8.9e-38 161.0 145 54.5
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 8.9e-38 161.0 148 58.1
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 1.5e-37 160.2 151 53.0
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 2.2e-36 156.4 119 65.5
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 8.3e-36 154.5 125 63.2
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 1.8e-35 153.3 118 64.4
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 3.2e-35 152.5 145 51.0
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.8e-34 147.9 146 52.1
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.8e-34 147.9 152 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 1.3e-33 147.1 145 49.7
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.3e-33 146.4 152 50.7
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 3.3e-32 142.5 141 48.9
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 4.3e-32 142.1 130 56.9
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 4.7e-31 138.7 125 54.4
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 2.3e-30 136.3 155 47.1
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 8.9e-30 134.4 125 56.0
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 3.4e-29 132.5 153 48.4
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 1.3e-28 130.6 98 65.3
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 6.4e-28 128.3 110 60.9
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 8.3e-28 127.9 107 62.6
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 1.9e-27 126.7 110 58.2
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 3.2e-27 125.9 135 50.4
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.7e-25 120.2 108 56.5
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 5.0e-25 118.6 97 60.8
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 3.6e-23 112.5 77 68.8
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 4.0e-22 109.0 147 40.1
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 7.1e-19 98.2 176 34.1
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 4.4e-13 79.0 204 31.9
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 5.8e-13 78.6 53 66.0
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 5.8e-13 78.6 53 67.9
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 3.2e-11 72.8 54 64.8
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 4.1e-11 72.4 53 62.3
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 4.6e-10 68.9 53 64.2
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 1.5e-08 63.9 53 50.9
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 2.5e-08 63.2 55 58.2


User provided reference genes

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