Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g009060.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.7e-56 222.2 99 100.0
Solyc07g009100.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 2.8e-51 204.9 96 93.8
Solyc07g009030.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 6.3e-51 203.8 98 91.8
Solyc07g009090.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 6.3e-51 203.8 98 90.8
Solyc07g009070.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.8e-50 202.2 99 89.9
Solyc07g009020.2 Solanum lycopersicum HOM05D010303 ORTHO05D011265 5.5e-47 190.7 88 95.5
Sopen07g005030 Solanum pennellii HOM05D010303 ORTHO05D011265 1.2e-46 189.5 88 94.3
Solyc07g009080.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.6e-46 189.1 92 91.3
PGSC0003DMG400028755 Solanum tuberosum HOM05D010303 ORTHO05D011265 3.6e-46 188.0 88 94.3
Solyc07g009040.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.0e-45 186.4 88 93.2
Sopen07g005050 Solanum pennellii HOM05D010303 ORTHO05D011265 1.0e-45 186.4 88 93.2
Sopen07g005010 Solanum pennellii HOM05D010303 ORTHO05D011265 1.4e-45 186.0 88 92.0
Sopen07g005040 Solanum pennellii HOM05D010303 ORTHO05D011265 8.8e-45 183.3 88 92.0
Sopen07g004990 Solanum pennellii HOM05D010303 ORTHO05D011265 1.5e-44 182.6 88 90.9
Solyc07g009050.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 4.4e-44 181.0 88 90.9
Sopen07g005020 Solanum pennellii HOM05D010303 ORTHO05D011265 2.3e-37 158.7 88 84.1
CAN.G715.4 Capsicum annuum HOM05D010303 ORTHO05D011265 1.1e-34 149.8 87 75.9
CAN.G1207.9 Capsicum annuum HOM05D010303 ORTHO05D011265 2.7e-33 145.2 63 93.7
Peaxi162Scf00003g00812 Petunia axillaris HOM05D010303 ORTHO05D011265 2.7e-33 145.2 88 73.9
Peaxi162Scf00195g01222 Petunia axillaris HOM05D010303 ORTHO05D011265 4.5e-33 144.4 87 75.9
Peaxi162Scf00047g01535 Petunia axillaris HOM05D010303 ORTHO05D011265 8.6e-32 140.2 88 73.9
Solyc07g008980.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 8.3e-27 123.6 87 66.7
BraA08t34910Z Brassica rapa HOM05D002484 ORTHO05D002541 3.0e-08 62.0 85 37.6
BcaB03g12908 Brassica carinata HOM05D002484 ORTHO05D002541 3.9e-08 61.6 85 37.6
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 5.1e-08 61.2 87 36.8
Nitab4.5_0002537g0050 Nicotiana tabacum HOM05D024896 ORTHO05D011265 8.6e-08 60.5 66 45.5
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 3.3e-07 58.5 84 35.7
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 5.6e-07 57.8 82 36.6
PGSC0003DMG400011185 Solanum tuberosum HOM05D015613 ORTHO05D011265 9.5e-07 57.0 85 42.4
HanXRQChr16g0506041 Helianthus annuus HOM05D002484 ORTHO05D002541 1.6e-06 56.2 94 34.0
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 1.6e-06 56.2 78 39.7
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 2.1e-06 55.8 87 32.2
Sp1g17450 Schrenkiella parvula HOM05D002484 ORTHO05D002541 3.6e-06 55.1 84 34.5
AT1G19610 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 6.2e-06 54.3 84 34.5
Thhalv10009242m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 8.1e-06 53.9 84 33.3


User provided reference genes

Program Settings