Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.5e-91 338.2 161 100.0
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 4.3e-89 331.3 161 96.3
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 4.0e-87 324.7 161 94.4
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.4e-86 321.6 161 93.8
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.7e-85 319.3 161 90.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.4e-85 317.4 161 90.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.4e-78 294.7 158 84.2
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 3.7e-77 291.6 161 82.6
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.1e-76 290.0 158 82.3
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 82.9
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.9e-76 289.3 158 81.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.9e-76 289.3 157 84.1
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.4e-76 288.9 158 82.3
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 3.2e-76 288.5 158 82.9
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 7.1e-76 287.3 158 80.4
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.2e-76 287.0 158 82.3
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.2e-76 287.0 161 79.5
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.2e-75 286.6 156 83.3
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.2e-75 286.6 156 83.3
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.6e-75 286.2 158 79.7
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.7e-75 285.4 157 81.5
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.7e-75 285.4 159 81.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.5e-75 285.0 158 81.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 79.5
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 80.7
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 4.6e-75 284.6 157 81.5
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 156 82.7
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 6.0e-75 284.3 157 79.0
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 6.0e-75 284.3 158 81.0
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.9
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.7e-74 282.7 158 79.1
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 78.9
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 78.9
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.3e-74 282.3 135 97.8
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 79.5
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 79.7
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 5.1e-74 281.2 157 79.0
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 6.6e-74 280.8 161 78.3
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 8.6e-74 280.4 156 81.4
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.1e-73 280.0 158 78.5
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 77.0
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 80.1
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 79.5
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 77.0
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 156 80.1
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 80.4
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.3e-73 278.5 157 80.3
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 80.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.3e-73 277.3 158 77.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 7.3e-73 277.3 156 80.8
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 78.6
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 7.3e-73 277.3 158 78.5
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 9.5e-73 276.9 146 83.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 75.3
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 74.7
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 74.7
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.6e-72 276.2 158 76.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 76.6
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 74.7
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.1e-72 275.8 157 79.0
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-72 275.8 157 79.0
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-72 275.8 157 79.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.6e-72 275.0 146 84.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 3.6e-72 275.0 158 74.7
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 4.7e-72 274.6 158 74.1
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 73.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 6.2e-72 274.2 155 80.0
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 74.7
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 76.4
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.8e-71 272.7 158 74.1
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.4e-71 272.3 154 79.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 2.4e-71 272.3 154 77.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 3.1e-71 271.9 158 72.8
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 3.1e-71 271.9 158 77.8
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 5.2e-71 271.2 158 72.8
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.2e-71 271.2 158 76.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.0e-70 269.2 154 77.3
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.6e-70 268.9 159 76.1
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 2.6e-70 268.9 157 78.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.4e-70 268.5 160 75.6
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 4.4e-70 268.1 151 77.5
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 5.8e-70 267.7 166 71.1
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.8e-70 267.7 166 71.1
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 5.8e-70 267.7 142 83.1
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.2e-69 265.8 161 76.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.4e-68 262.3 211 60.2
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.2e-68 261.9 159 74.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 4.1e-68 261.5 156 76.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.1e-68 260.8 159 71.7
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-67 260.0 161 70.8
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.6e-67 258.1 161 70.2
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.3e-66 256.5 158 75.9
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.3e-66 256.5 147 79.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.6e-66 254.2 159 71.7
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.1e-65 253.4 151 72.8
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.5e-65 252.3 161 74.5
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 9.6e-65 250.4 141 79.4
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.1e-63 245.4 135 80.7
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.0e-63 245.0 138 79.7
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.2e-61 239.2 157 67.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 2.4e-60 235.7 137 74.5
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 7.3e-57 224.2 138 73.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 7.3e-57 224.2 117 85.5
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.0e-55 218.4 152 67.1
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 6.9e-55 217.6 161 66.5
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.6e-54 215.7 137 70.8
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.3e-53 213.4 116 83.6
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.2e-52 208.4 142 62.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 5.4e-52 208.0 114 80.7
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 9.3e-52 207.2 183 56.8
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 4.6e-51 204.9 140 65.0
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 6.0e-51 204.5 121 77.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.0e-50 202.2 142 61.3
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.5e-49 199.1 140 60.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.8e-48 195.7 157 61.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 9.0e-47 190.7 135 66.7
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.4e-46 188.7 114 72.8
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 6.4e-45 184.5 99 79.8
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.1e-44 183.7 95 85.3
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.8e-39 166.4 100 71.0
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.6e-38 162.5 157 54.8
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 6.5e-37 157.9 171 48.0
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.8e-34 149.8 135 57.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.1e-33 147.1 85 77.6
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.2e-32 142.9 86 74.4
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.6e-27 126.7 73 78.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 9.1e-23 110.9 52 94.2
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.8e-16 89.4 57 66.7
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 2.8e-08 62.8 68 44.1


User provided reference genes

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