Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 4.5e-61 237.7 113 100.0
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 5.5e-43 177.6 83 97.6
Solyc07g008373.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 7.0e-30 134.0 86 74.4
Sopen07g004270 Solanum pennellii HOM05D008282 ORTHO05D009173 6.8e-25 117.5 74 74.3
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 8.9e-17 90.5 89 41.6
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 8.9e-17 90.5 88 44.3
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 5.8e-16 87.8 75 49.3
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 5.8e-16 87.8 65 53.8
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 7.5e-16 87.4 79 49.4
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 2.2e-15 85.9 80 48.8
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 6.4e-15 84.3 77 49.4
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 8.3e-15 84.0 79 48.1
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.1e-14 83.6 75 42.7
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 1.9e-14 82.8 89 38.2
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 1.9e-14 82.8 77 48.1
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.2e-14 82.0 58 55.2
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 3.2e-14 82.0 58 55.2
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.4e-14 81.3 58 55.2
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 7.0e-14 80.9 83 43.4
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 7.0e-14 80.9 58 55.2
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 7.0e-14 80.9 58 53.4
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 7.0e-14 80.9 58 53.4
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 9.2e-14 80.5 80 45.0
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 9.2e-14 80.5 58 53.4
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 1.2e-13 80.1 82 43.9
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 2.0e-13 79.3 75 42.7
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 2.0e-13 79.3 75 42.7
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 2.7e-13 79.0 84 40.5
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.5e-13 78.6 58 51.7
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 4.6e-13 78.2 75 41.3
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 7.8e-13 77.4 87 40.2
Potri.005G074350 Populus trichocarpa HOM05D008282 ORTHO05D009173 7.8e-13 77.4 84 47.6
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.7e-12 76.3 58 50.0
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 2.3e-12 75.9 72 41.7
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 3.9e-12 75.1 75 40.0
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 3.9e-12 75.1 53 50.9
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 1.5e-11 73.2 66 42.4
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 2.5e-11 72.4 84 39.3
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 4.3e-11 71.6 85 40.0
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 5.6e-11 71.2 75 44.0
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 5.6e-11 71.2 74 43.2
MELO3C029307.2 Cucumis melo HOM05D008282 ORTHO05D009173 1.2e-10 70.1 65 43.1
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.6e-10 69.7 87 41.4
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 2.1e-10 69.3 87 41.4
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 2.1e-10 69.3 93 37.6
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 6.2e-10 67.8 58 50.0
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 1.1e-09 67.0 81 35.8
Thecc.05G205200 Theobroma cacao HOM05D008282 ORTHO05D000004 8.9e-09 63.9 83 37.3
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.5e-08 63.2 85 38.8
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 7.5e-08 60.8 46 47.8
ClCG03G016530 Citrullus lanatus HOM05D008282 ORTHO05D009173 6.4e-07 57.8 47 48.9
Gohir.A02G058204 Gossypium hirsutum HOM05D008282 ORTHO05D009173 6.4e-07 57.8 58 44.8
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 6.4e-07 57.8 74 36.5


User provided reference genes

Program Settings