Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g008373.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 9.8e-45 183.0 84 100.0
Sopen07g004270 Solanum pennellii HOM05D008282 ORTHO05D009173 8.0e-39 163.3 73 98.6
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 5.2e-30 134.0 86 74.4
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.2e-29 132.9 86 73.3
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 2.8e-15 85.1 91 41.8
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 1.8e-14 82.4 92 40.2
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 7.6e-13 77.0 92 39.1
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.3e-12 76.3 61 50.8
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.3e-12 76.3 61 50.8
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 2.2e-12 75.5 83 42.2
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 2.2e-12 75.5 81 42.0
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.2e-12 75.5 61 50.8
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.2e-12 75.5 61 50.8
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.9e-12 75.1 61 49.2
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.9e-12 75.1 61 49.2
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 4.9e-12 74.3 56 51.8
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 4.9e-12 74.3 61 49.2
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.1e-11 73.2 82 37.8
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.9e-11 72.4 80 40.0
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 1.9e-11 72.4 76 43.4
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 3.2e-11 71.6 56 50.0
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 4.1e-11 71.2 61 49.2
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 5.4e-11 70.9 85 38.8
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 7.1e-11 70.5 87 39.1
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 7.1e-11 70.5 87 37.9
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 9.2e-11 70.1 77 40.3
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 1.2e-10 69.7 56 48.2
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 1.2e-10 69.7 56 48.2
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 1.2e-10 69.7 56 48.2
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 1.2e-10 69.7 56 48.2
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.6e-10 69.3 61 47.5
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 2.1e-10 68.9 81 40.7
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 4.6e-10 67.8 90 37.8
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 6.0e-10 67.4 81 40.7
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 1.0e-09 66.6 82 39.0
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 1.0e-09 66.6 67 40.3
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 1.3e-09 66.2 69 42.0
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 2.3e-09 65.5 51 52.9
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 3.9e-09 64.7 75 42.7
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.9e-08 62.4 61 45.9
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 4.3e-08 61.2 61 39.3
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 4.7e-07 57.8 78 34.6
Thecc.05G205200 Theobroma cacao HOM05D008282 ORTHO05D000004 1.1e-06 56.6 58 43.1


User provided reference genes

Program Settings