Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.3e-140 503.1 252 100.0
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.8e-134 482.6 252 97.6
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 7.0e-131 470.7 252 95.2
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.5e-122 441.8 256 87.5
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.3e-120 434.1 261 85.1
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 5.2e-118 427.9 252 86.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 6.9e-110 401.0 263 81.0
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.1e-99 367.1 255 71.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.1e-99 367.1 251 74.1
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 2.1e-98 362.8 248 73.8
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 5.1e-97 358.2 251 70.5
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 9.6e-96 354.0 249 72.3
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.6e-95 353.2 247 72.5
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.1e-95 352.8 248 71.4
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.8e-95 352.4 253 70.4
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 3.7e-95 352.1 247 72.5
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 4.8e-95 351.7 252 69.0
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.8e-95 351.7 247 71.7
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.4e-94 350.1 207 79.2
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 3.1e-94 349.0 246 70.7
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.3e-94 348.2 206 79.6
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 6.9e-94 347.8 247 70.4
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 1.2e-93 347.1 258 69.0
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 3.4e-93 345.5 254 68.1
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 5.8e-93 344.7 247 69.2
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 5.8e-93 344.7 206 78.6
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.8e-93 344.7 206 78.6
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 5.8e-93 344.7 246 72.0
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.7e-92 343.2 202 79.2
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.7e-92 343.2 248 69.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 2.9e-92 342.4 248 69.0
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 4.9e-92 341.7 256 67.6
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 4.9e-92 341.7 218 74.3
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 8.4e-92 340.9 246 72.4
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.4e-92 340.9 252 66.3
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.1e-91 340.5 252 67.9
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.4e-91 340.1 300 62.3
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.5e-91 339.3 233 70.8
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 2.5e-91 339.3 241 71.0
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 3.5e-90 335.5 249 69.1
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.5e-90 335.5 232 70.3
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 6.0e-90 334.7 214 74.8
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-89 334.0 244 66.8
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.0e-89 334.0 250 66.4
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 2.3e-89 332.8 252 68.7
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 8.7e-89 330.9 207 75.4
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.1e-88 330.5 252 65.9
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.5e-88 330.1 204 74.5
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.5e-88 330.1 204 74.5
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.5e-88 330.1 245 66.9
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.5e-88 330.1 204 75.0
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.5e-88 329.3 219 72.1
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 4.3e-88 328.6 248 68.1
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 5.6e-88 328.2 200 76.5
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 5.6e-88 328.2 247 67.6
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 7.4e-88 327.8 202 74.8
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 7.4e-88 327.8 202 74.8
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.3e-87 327.0 249 67.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.3e-87 327.0 204 77.0
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.1e-87 326.2 232 68.5
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 6.2e-87 324.7 230 67.0
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.1e-86 323.9 207 75.8
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 4.0e-86 322.0 248 65.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 9.0e-86 320.9 246 63.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.5e-85 320.1 233 68.2
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 2.0e-85 319.7 213 71.4
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.6e-85 319.3 244 64.8
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 2.6e-85 319.3 230 67.8
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 4.5e-85 318.5 246 66.3
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.5e-85 318.5 253 63.6
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 5.8e-85 318.2 250 65.2
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.2e-84 316.2 236 68.6
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 2.2e-84 316.2 223 69.1
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.9e-84 315.8 253 63.6
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 8.4e-84 314.3 199 72.9
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.9e-83 313.2 252 65.1
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 1.9e-83 313.2 223 68.6
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 7.1e-83 311.2 238 66.8
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 1.6e-82 310.1 252 63.5
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.0e-82 308.1 200 74.0
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.0e-81 307.4 177 79.1
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 3.0e-81 305.8 262 63.7
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 5.1e-81 305.1 236 66.5
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 8.7e-81 304.3 170 82.4
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.9e-80 303.1 169 80.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.3e-80 302.4 188 74.5
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.3e-79 300.4 168 82.7
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.2e-79 299.7 228 64.5
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.7e-79 298.9 206 69.9
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 4.8e-79 298.5 184 77.7
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 6.3e-79 298.1 217 67.7
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 5.3e-78 295.0 252 62.3
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 6.5e-76 288.1 206 67.5
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.4e-75 287.0 209 67.5
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 7.9e-74 281.2 169 78.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 5.7e-72 275.0 170 75.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 5.0e-68 261.9 190 64.7
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 4.4e-64 248.8 252 55.6
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-61 240.4 177 67.2
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.5e-60 235.0 139 78.4
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 4.2e-59 232.3 252 53.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 9.7e-56 221.1 171 57.3
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 7.7e-53 211.5 249 47.4
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.9e-52 209.5 216 48.6
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.7e-39 166.0 176 57.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 3.1e-38 162.9 157 51.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 3.9e-28 129.4 170 47.1
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.6e-24 116.7 75 74.7
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 9.2e-22 108.2 63 76.2
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.0e-20 104.8 237 33.8
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 6.6e-20 102.1 59 76.3
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.1e-18 97.1 74 62.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.6e-10 69.7 62 50.0


User provided reference genes

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