Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g006980.1 Solanum lycopersicum HOM05D000043 ORTHO05D392225 4.2e-40 167.5 83 100.0
Atru.chr7.893 Acer truncatum HOM05D000043 ORTHO05D000600 1.0e-06 56.6 34 79.4
Nitab4.5_0010151g0010 Nicotiana tabacum HOM05D000043 ORTHO05D000600 1.8e-06 55.8 34 76.5
Cpa.g.sc115.50 Carica papaya HOM05D000043 ORTHO05D000600 2.3e-06 55.5 46 60.9
Ciclev10008256m.g Citrus clementina HOM05D000043 ORTHO05D000600 2.3e-06 55.5 34 76.5
PGSC0003DMG400018756 Solanum tuberosum HOM05D000043 ORTHO05D000600 2.3e-06 55.5 34 79.4
COL.COLO4_34337 Corchorus olitorius HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
FAN17G0648 Fragaria x ananassa HOM05D000043 ORTHO05D000600 4.0e-06 54.7 43 67.4
Glyma.13G102900 Glycine max HOM05D000043 ORTHO05D000600 4.0e-06 54.7 43 67.4
Gohir.A08G017300 Gossypium hirsutum HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Gohir.A13G182200 Gossypium hirsutum HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Gohir.D08G027800 Gossypium hirsutum HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Gohir.D13G185100 Gossypium hirsutum HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Gorai.004G024900 Gossypium raimondii HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Gorai.013G211200 Gossypium raimondii HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
Phvul.003G138100 Phaseolus vulgaris HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 76.5
SEGI_06148 Sequoiadendron giganteum HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 73.5
VMungo1215G3306 Vigna mungo HOM05D000043 ORTHO05D000600 4.0e-06 54.7 34 76.5
CSS0009512 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D000600 5.2e-06 54.3 34 76.5
Cc06_g12960 Coffea canephora HOM05D000043 ORTHO05D000600 5.2e-06 54.3 43 67.4
Migut.J01506 Erythranthe guttata HOM05D000043 ORTHO05D000600 5.2e-06 54.3 34 76.5
Hma1.2p1_0726F.1_g208960 Hydrangea macrophylla HOM05D000043 ORTHO05D000600 5.2e-06 54.3 34 76.5
Nitab4.5_0000957g0060 Nicotiana tabacum HOM05D000043 ORTHO05D000600 5.2e-06 54.3 38 65.8
Rhsim04G0004100 Rhododendron simsii HOM05D000043 ORTHO05D000600 5.2e-06 54.3 34 76.5
GSVIVG01029232001 Vitis vinifera HOM05D000043 ORTHO05D000600 5.2e-06 54.3 34 76.5
DCAR_020139 Daucus carota HOM05D000043 ORTHO05D000600 6.8e-06 53.9 32 78.1
Potri.006G071500 Populus trichocarpa HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 73.5
Potri.018G133000 Populus trichocarpa HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 73.5
Sabra18G0112700 Salix brachista HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 73.5
Sc13g0007710 Simmondsia chinensis HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 70.6
THA.LOC104810999 Tarenaya hassleriana HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 73.5
TWI63G1148 Tripterygium wilfordii HOM05D000043 ORTHO05D000600 6.8e-06 53.9 34 73.5
Cfa013484 Carpinus fangiana HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
ClCG11G011520 Citrullus lanatus HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
MELO3C003945.2 Cucumis melo HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
CsaV3_2G009000 Cucumis sativus L. HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
DCAR_014685 Daucus carota HOM05D000043 ORTHO05D000600 8.8e-06 53.5 32 78.1
Duzib170G0624 Durio zibethinus HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 70.6
Eucgr.C00073 Eucalyptus grandis HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
FvH4_4g06600 Fragaria vesca HOM05D000043 ORTHO05D000600 8.8e-06 53.5 43 65.1
FAN12G2905 Fragaria x ananassa HOM05D000043 ORTHO05D000600 8.8e-06 53.5 43 65.1
FAN22G1447 Fragaria x ananassa HOM05D000043 ORTHO05D000600 8.8e-06 53.5 43 65.1
Glyma.17G056200 Glycine max HOM05D000043 ORTHO05D000600 8.8e-06 53.5 43 65.1
Manes.06G000400 Manihot esculenta HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 70.6
Nn8g40417 Nelumbo nucifera HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 70.6
Oeu009076.1 Olea europaea HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 76.5
PSO063G1132 Papaver somniferum HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 70.6
PSO170G5056 Papaver somniferum HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 70.6
PGR142G2009 Punica granatum HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
RcHm_v2.0_Chr4g0398521 Rosa chinensis HOM05D000043 ORTHO05D000600 8.8e-06 53.5 43 65.1
Sed0008734 Sechium edule HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
Sed0023733 Sechium edule HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 73.5
Sopen07g003020 Solanum pennellii HOM05D000043 ORTHO05D000600 8.8e-06 53.5 34 76.5


User provided reference genes

Program Settings