Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 8.5e-73 276.9 144 100.0
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 9.4e-72 273.5 144 97.2
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.3e-65 252.3 144 91.0
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 6.1e-55 217.6 148 76.4
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.7e-42 175.6 139 70.5
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 4.3e-40 168.3 110 80.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.5e-37 159.8 147 57.8
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 6.4e-36 154.5 152 58.6
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 6.4e-36 154.5 148 59.5
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 1.9e-35 152.9 149 57.0
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 7.1e-35 151.0 146 56.8
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 9.2e-35 150.6 150 57.3
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 7.8e-34 147.5 145 55.2
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.7e-33 146.4 146 57.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.9e-32 142.9 143 53.8
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.9e-32 142.9 146 56.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.5e-32 142.5 143 53.1
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 4.3e-32 141.7 143 54.5
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 5.6e-32 141.4 141 54.6
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 5.6e-32 141.4 141 54.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.1e-31 139.4 141 53.9
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 2.8e-31 139.0 137 55.5
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 4.7e-31 138.3 151 55.0
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 6.2e-31 137.9 149 53.0
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.0e-30 135.2 122 55.7
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 5.2e-30 134.8 140 52.1
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 8.9e-30 134.0 124 56.5
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 8.9e-30 134.0 145 51.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.2e-29 133.7 116 58.6
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 1.5e-29 133.3 145 54.5
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.0e-29 132.9 110 65.5
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.0e-29 132.9 110 65.5
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 3.4e-29 132.1 142 52.8
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 3.4e-29 132.1 108 65.7
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 5.8e-29 131.3 101 70.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 7.6e-29 131.0 148 53.4
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.7e-28 129.8 102 68.6
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.7e-28 129.8 150 50.7
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-28 129.4 101 69.3
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.9e-28 129.0 101 68.3
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.9e-28 129.0 142 51.4
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 3.8e-28 128.6 124 56.5
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 3.8e-28 128.6 106 66.0
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 3.8e-28 128.6 118 59.3
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 4.9e-28 128.3 110 62.7
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 4.9e-28 128.3 145 49.7
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 6.4e-28 127.9 110 61.8
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 6.4e-28 127.9 101 67.3
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 8.4e-28 127.5 109 63.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 8.4e-28 127.5 109 63.3
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.1e-27 127.1 111 62.2
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 1.9e-27 126.3 111 61.3
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 2.4e-27 125.9 101 65.3
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.4e-27 125.9 74 87.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 3.2e-27 125.6 101 66.3
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 4.1e-27 125.2 108 63.0
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 5.4e-27 124.8 101 66.3
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 5.4e-27 124.8 126 54.8
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 5.4e-27 124.8 144 51.4
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 7.1e-27 124.4 91 71.4
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 9.2e-27 124.0 138 50.0
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.6e-26 123.2 118 55.1
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.7e-26 122.5 95 65.3
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 3.5e-26 122.1 109 62.4
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 3.5e-26 122.1 95 64.2
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 6.0e-26 121.3 133 53.4
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 6.0e-26 121.3 140 50.7
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 7.8e-26 120.9 91 67.0
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 1.7e-25 119.8 145 49.0
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 3.9e-25 118.6 135 48.9
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 6.6e-25 117.9 101 60.4
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 6.6e-25 117.9 102 61.8
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 8.7e-25 117.5 113 57.5
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.1e-24 117.1 131 48.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.1e-24 117.1 129 55.0
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.5e-24 116.7 135 51.9
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 3.3e-24 115.5 111 57.7
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 4.3e-24 115.2 131 50.4
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 5.6e-24 114.8 107 57.9
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 7.3e-24 114.4 122 53.3
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 7.3e-24 114.4 86 72.1
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 9.6e-24 114.0 84 73.8
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 9.6e-24 114.0 97 61.9
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.6e-23 113.2 142 47.9
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 8.1e-23 110.9 109 56.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.1e-22 110.5 109 56.9
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.1e-22 110.5 118 54.2
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 9.0e-22 107.5 139 46.0
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.6e-21 105.9 71 77.5
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.3e-20 103.6 85 62.4
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.3e-20 103.6 106 56.6
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 3.8e-20 102.1 140 48.6
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.1e-19 100.5 70 71.4
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.1e-19 100.5 75 68.0
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.2e-19 99.0 112 50.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 4.2e-19 98.6 145 46.2
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 5.4e-19 98.2 106 53.8
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.3e-17 92.8 93 54.8
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 3.0e-17 92.4 72 66.7
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 3.9e-17 92.0 91 57.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.3e-15 87.0 92 52.2
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 2.8e-15 85.9 98 45.9
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.4e-14 82.8 97 45.4
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 3.1e-14 82.4 72 61.1
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.7e-12 76.6 96 46.9
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 3.8e-12 75.5 77 44.2
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.1e-11 73.9 58 63.8
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 6.0e-10 68.2 101 47.5
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 1.0e-09 67.4 42 76.2


User provided reference genes

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