Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.7e-61 239.2 125 100.0
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 4.5e-54 214.5 125 88.8
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 2.0e-38 162.5 125 69.6
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 3.2e-23 112.1 123 48.8
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 2.0e-22 109.4 123 50.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 3.5e-22 108.6 109 52.3
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 4.6e-22 108.2 124 50.0
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 6.0e-22 107.8 99 56.6
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 7.8e-22 107.5 87 59.8
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 1.3e-21 106.7 96 57.3
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-21 106.7 96 54.2
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 5.0e-21 104.8 121 52.9
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 5.0e-21 104.8 110 51.8
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 6.6e-21 104.4 96 54.2
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 8.6e-21 104.0 125 48.8
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 8.6e-21 104.0 129 48.8
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-20 103.6 123 47.2
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.9e-20 102.8 96 53.1
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.9e-20 102.8 100 60.0
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 2.5e-20 102.4 86 58.1
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 2.5e-20 102.4 86 58.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 4.3e-20 101.7 112 48.2
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 4.3e-20 101.7 63 77.8
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 5.6e-20 101.3 128 50.8
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 5.6e-20 101.3 90 61.1
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.2e-19 100.1 123 48.8
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-19 99.8 109 50.5
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.6e-19 99.8 93 52.7
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.8e-19 99.0 82 57.3
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 3.6e-19 98.6 121 44.6
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.7e-19 98.2 86 53.5
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 4.7e-19 98.2 110 49.1
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 6.2e-19 97.8 95 50.5
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 6.2e-19 97.8 82 57.3
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 6.2e-19 97.8 82 54.9
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 6.2e-19 97.8 82 59.8
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 6.2e-19 97.8 107 49.5
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.4e-18 96.7 108 48.1
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 2.3e-18 95.9 86 54.7
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 3.1e-18 95.5 88 50.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 3.1e-18 95.5 88 50.0
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 3.1e-18 95.5 122 44.3
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 3.1e-18 95.5 124 44.4
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 4.0e-18 95.1 125 45.6
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 4.0e-18 95.1 104 48.1
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 4.0e-18 95.1 90 50.0
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 6.8e-18 94.4 84 56.0
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 8.9e-18 94.0 80 51.2
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 1.2e-17 93.6 88 52.3
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.5e-17 93.2 110 49.1
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 2.0e-17 92.8 84 50.0
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 2.0e-17 92.8 85 52.9
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.0e-17 92.8 124 43.5
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 5.8e-17 91.3 74 56.8
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 7.5e-17 90.9 91 51.6
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 9.8e-17 90.5 81 53.1
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.3e-16 90.1 110 48.2
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.3e-16 90.1 64 64.1
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.3e-16 90.1 64 64.1
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 1.3e-16 90.1 64 64.1
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 1.3e-16 90.1 109 45.9
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.3e-16 90.1 105 49.5
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.7e-16 89.7 84 53.6
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.7e-16 89.7 111 45.0
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 2.2e-16 89.4 88 48.9
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.2e-16 89.4 111 45.0
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 2.2e-16 89.4 110 44.5
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 2.9e-16 89.0 89 49.4
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 4.9e-16 88.2 129 42.6
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 4.9e-16 88.2 122 42.6
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 6.4e-16 87.8 85 49.4
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 8.3e-16 87.4 65 60.0
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.1e-15 87.0 88 46.6
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.1e-15 87.0 88 46.6
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.1e-15 87.0 82 51.2
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 1.1e-15 87.0 62 64.5
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 1.4e-15 86.7 121 46.3
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 1.4e-15 86.7 124 42.7
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.4e-15 85.9 101 43.6
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 3.2e-15 85.5 75 54.7
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 3.2e-15 85.5 86 47.7
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 3.2e-15 85.5 120 40.0
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 9.2e-15 84.0 96 46.9
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 1.2e-14 83.6 84 51.2
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 1.6e-14 83.2 146 36.3
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 6.0e-14 81.3 88 46.6
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 1.0e-13 80.5 102 43.1
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.0e-13 80.5 62 58.1
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 6.6e-13 77.8 85 50.6
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 6.6e-13 77.8 110 43.6
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.6e-11 73.2 61 52.5
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.6e-11 72.0 89 43.8
Nitab4.5_0001036g0140 Nicotiana tabacum HOM05D007659 ORTHO05D009227 6.8e-10 67.8 64 64.1
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 4.4e-09 65.1 58 50.0
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 1.7e-08 63.2 57 47.4
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 2.2e-08 62.8 104 30.8


User provided reference genes

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